FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_SYNFM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22 Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 120 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 H PL+G+ AIKD+ + G VT G+ T A L GA +GKT MDE A + EN YG NPW +RVP L SLGTDTGGS+R PAS+CG+ G +P++G VS G++ A S D +G Sbjct: 66 HASPLAGIPLAIKDVLCMQGTVTTCGSRILENFVPPYDGTVIARLR--EAGAIFLGKTNMDEFAMGSSTENSAYGVTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCGVVGLKPTYGRVSRFGLVAFASSLDQIG 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 58/150 (38.67%), Postives = 78/150 (52.00%), Query Frame = 3 Query: 120 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 H+ PL+G+ AIKD V G G+ A + +LS GA +GKT MDE A + E H+G NPW +RVP F+LG+DTGGSVR PAS+CG+ G +P++G+VS GV+ A S + VG Sbjct: 58 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCGVVGLKPTYGAVSRYGVVAYANSLEQVG 205
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_AZOSE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) GN=gatA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 58/149 (38.93%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWF 575 PL+G+ A KD+F +G +T G+ A + + A V + + GA S+GKT MDE A + EN H+G NPW R+P +LV + GTDTGGSVR PA+ G+ G +P++G VS G+I A S D G F Sbjct: 67 PLTGIPLAHKDVFCTEGVLTTCGSKMLA--NFVSPYDAHVVSLLKTAGAVSLGKTNMDEFAMGSSNENSHFGPAKNPWDTTRIPGGSSGGSAAAVAARLVPIATGTDTGGSVRQPAALTGVTGIKPTYGVVSRYGMIAYASSLDQGGAF 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_LEGPL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Lens) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21 Identity = 57/150 (38.00%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 PL+G+ A+KD+F T + A + +T V GA IGKT MDE A + EN ++G+ NPW +RVP LV F++G+DTGGS+R PA++CGI G +P++G VS G++ A S D G FA Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQAPYDATI--VTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFA 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_LEGPC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Corby) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21 Identity = 57/150 (38.00%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 PL+G+ A+KD+F T + A + +T V GA IGKT MDE A + EN ++G+ NPW +RVP LV F++G+DTGGS+R PA++CGI G +P++G VS G++ A S D G FA Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQAPYDATI--VTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFA 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_LEGPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Paris) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21 Identity = 57/150 (38.00%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 PL+G+ A+KD+F T + A + +T V GA IGKT MDE A + EN ++G+ NPW +RVP LV F++G+DTGGS+R PA++CGI G +P++G VS G++ A S D G FA Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQAPYDATI--VTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFA 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DEIRA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus radiodurans GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21 Identity = 68/180 (37.78%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 126 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-QLPDDA-SLVRPSR 659 LPL+G+ +KD +V G T G+ A S T+TA L GA +GK MDE A + E+ G NPW +RVP + SLG+DTGGSVR PA+ CG++GF+P++G VS G++ A S D +G FA + L + V+ P DA SL P+R Sbjct: 65 LPLAGVPIVVKDNINVTGTRTTCGSRMLANYVSPYTATAAQKLQ--GAGAVIVGKANMDEFAMGSSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQPAALCGVYGFKPTYGRVSRYGLVAYASSLDQIGPFARSAEDLALLMNVIAGHDPRDATSLDAPAR 242
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NEIM0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup C (strain 053442) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 59/161 (36.65%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + Q ++SA L+G+ A KDIF G + + S+ T+T V +L G ++G+T MDE A EN YG NPW P+ VP +L +LG+DTGGS+R PAS+CGI G +P++G+VS G++ A SFD G Sbjct: 57 DERIAQGNASA----LTGIPVAYKDIFCQTGWRSACASKMLDNFISSYTATV--VQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 58/151 (38.41%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAW 581 PL G+ AIKD+ DG T G+ A +T + +++ GA +GK DE A + EN Y TNPW P RVP V +LGTDTGGS+R PA+ CGI G +P++G VS G+I S D +G AW Sbjct: 71 PLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYNATV--IERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAW 219
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 58/151 (38.41%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAW 581 PL G+ AIKD+ DG T G+ A +T + +++ GA +GK DE A + EN Y TNPW P RVP V +LGTDTGGS+R PA+ CGI G +P++G VS G+I S D +G AW Sbjct: 71 PLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYNATV--IERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAW 219 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |