FC923255

Overview
NameFC923255
Unique NameFC923255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: KAP1_ARATH (Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=AKN1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.718e-25
Identity = 38/43 (88.37%), Postives = 41/43 (95.35%), Query Frame = 3 
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            DRDACRS+LPEGDF+EVFMDVPL VCEARDPKGLYKLAR GK+
Sbjct:  187 DRDACRSLLPEGDFVEVFMDVPLSVCEARDPKGLYKLARAGKI 229

HSP 2 Score: 50.8322 bits (120), Expect = 1.718e-25
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLNRDLSFKAEDR ENIRR+ ++
Sbjct:  138 DNVRHGLNRDLSFKAEDRAENIRRVGEV 165
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: KAPS_CATRO (Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus GN=AKN PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.045e-24
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 3 
Query:   78 KDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            K  DACRS+LPEGDFIEVFMDVPL+VCEARDPKGLYKLAR GK+
Sbjct:  220 KPPDACRSLLPEGDFIEVFMDVPLKVCEARDPKGLYKLARAGKI 263

HSP 2 Score: 48.9062 bits (115), Expect = 4.045e-24
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLN DLSFKAEDR ENIRRI ++
Sbjct:  172 DNVRHGLNSDLSFKAEDRAENIRRIGEV 199

HSP 3 Score: 70.4774 bits (171), Expect = 1.109e-11
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 2 
Query:  164 KGPKG--PLQACTRREGFTGIDDPYEPPLNCEIVLKQTGDDCPSPADMVETVVSYLDDNGFLRA 349
            + PKG   L    + +GFTGIDDPYEPPL  EIVL Q    C SP D+ + V+SYL++NG+L+A
Sbjct:  249 RDPKGLYKLARAGKIKGFTGIDDPYEPPLKSEIVLHQKLGMCDSPCDLADIVISYLEENGYLKA 312
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: KAP2_ARATH (Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=AKN2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.271e-24
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 3 
Query:   78 KDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +DRDACRS+LP+GDF+EVFMDVPL VCE+RDPKGLYKLAR GK+
Sbjct:  200 RDRDACRSLLPDGDFVEVFMDVPLHVCESRDPKGLYKLARAGKI 243

HSP 2 Score: 47.3654 bits (111), Expect = 5.271e-24
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLNRDL+FKAE R ENIRRI ++
Sbjct:  152 DNVRHGLNRDLTFKAEHRTENIRRIGEV 179

HSP 3 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 2 
Query:  164 KGPKG--PLQACTRREGFTGIDDPYEPPLNCEIVLKQTGDD-CPSPADMVETVVSYLDDNGFL 343
            + PKG   L    + +GFTGIDDPYE P+NCE+VLK TGDD   SP  M E ++SYL + G+L
Sbjct:  229 RDPKGLYKLARAGKIKGFTGIDDPYEAPVNCEVVLKHTGDDESCSPRQMAENIISYLQNKGYL 291
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_ACAM1 (Adenylyl-sulfate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=cysC PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.036e-19
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            DRD  R ++PEGDFIE++    L+VCE RD KGLYK AR G++
Sbjct:  114 DRDRVRELVPEGDFIEIYCQASLEVCEERDVKGLYKKARSGEI 156

HSP 2 Score: 42.3578 bits (98), Expect = 1.036e-19
Identity = 19/28 (67.86%), Postives = 22/28 (78.57%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL  DL F +EDRVENIRRI ++
Sbjct:   65 DNIRHGLCADLGFSSEDRVENIRRIGEV 92

HSP 3 Score: 35.8094 bits (81), Expect = 1.036e-19
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 2 
Query:  209 FTGIDDPYEPPLNCEIVLKQTGDDCPSPADMVETVVSYLDDNGFLR 346
            FTGI  PYEPP   EI++K TG+D  S     + V+ +L + G ++
Sbjct:  159 FTGISSPYEPPEEPEIIVK-TGED--SLEVCAQQVIEFLQERGIVQ 201
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFA (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa GN=cysNC PE=3 SV=2)

HSP 1 Score: 48.9062 bits (115), Expect = 1.744e-17
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLNRDLSF  EDRVENIRR+ ++
Sbjct:  489 DNVRHGLNRDLSFTVEDRVENIRRVAEV 516

HSP 2 Score: 47.3654 bits (111), Expect = 1.744e-17
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 3 
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +R   R      +F+EVF+DVPL V EARD KGLY  AR G +
Sbjct:  538 ERQLARERFAANEFVEVFVDVPLAVAEARDVKGLYAKARAGLI 580

HSP 3 Score: 33.4982 bits (75), Expect = 1.744e-17
Identity = 17/39 (43.59%), Postives = 24/39 (61.54%), Query Frame = 2 
Query:  209 FTGIDDPYEPPLNCEIVLKQTGDDCPSPADMVETVVSYL 325
            FTGID PYEPP + E+ L+    D  +P  +   V+S+L
Sbjct:  583 FTGIDSPYEPPPHPELHLRA---DQGTPEQLASQVLSFL 618
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFT (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysNC PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 2.924e-17
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLNRDLSF  EDRVENIRR+ ++
Sbjct:  489 DNVRHGLNRDLSFTVEDRVENIRRVAEV 516

HSP 2 Score: 46.9802 bits (110), Expect = 2.924e-17
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 3 
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +R   R      +F+EVF+DVPL V EARD KGLY  AR G +
Sbjct:  538 ERQLARERFAADEFVEVFVDVPLAVAEARDVKGLYAKARAGLI 580

HSP 3 Score: 33.113 bits (74), Expect = 2.924e-17
Identity = 18/43 (41.86%), Postives = 24/43 (55.81%), Query Frame = 2 
Query:  209 FTGIDDPYEPPLNCEIVLKQTGDDCPSPADMVETVVSYLDDNG 337
            FTGID PYEPP + E+ L+    D  +P  +   V+S L   G
Sbjct:  583 FTGIDSPYEPPQHPELHLRA---DQGTPEQLASQVLSLLGVEG 622
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_SHEDO (Adenylyl-sulfate kinase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=cysC PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 5.303e-16
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +RD  R++ PEG FIEV +  PL VCEARDPKGLY  AR G++
Sbjct:  110 ERDRVRALFPEGRFIEVHVSTPLSVCEARDPKGLYVKARSGEI 152

HSP 2 Score: 36.965 bits (84), Expect = 5.303e-16
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL +DL F   DR EN+RR+ ++
Sbjct:   61 DNVRHGLCKDLGFSLSDRDENLRRVGEV 88

HSP 3 Score: 28.4906 bits (62), Expect = 5.303e-16
Identity = 14/39 (35.90%), Postives = 21/39 (53.85%), Query Frame = 2 
Query:  209 FTGIDDPYEPPLNCEIVLKQTGDDCPSPADMVETVVSYL 325
            FTGI  PYE P   E+ +  +  D    A  V+ +++YL
Sbjct:  155 FTGISSPYEAPTAAELTIDTSRGDL---ATQVQAMLAYL 190
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC2_BACSU (Probable adenylyl-sulfate kinase OS=Bacillus subtilis GN=yisZ PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 6.801e-16
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 3 
Query:   78 KDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +DRD  R++ P+G+F E+++  PL VCE RDPKGLYK AR G++
Sbjct:  112 EDRDMVRALFPKGEFFEIYVKCPLHVCEQRDPKGLYKKARNGEI 155

HSP 2 Score: 43.8986 bits (102), Expect = 6.801e-16
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLN+DL F+  DR+ENIRRI ++
Sbjct:   64 DNIRHGLNKDLGFQTGDRIENIRRIGEV 91
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_STACT (Adenylyl-sulfate kinase OS=Staphylococcus carnosus (strain TM300) GN=cysC PE=3 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 1.153e-15
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 3 
Query:   78 KDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +DRD  R +L +G+F+EV+    +  CE RDPK LYK  R G++
Sbjct:  112 EDRDHVREILEDGEFVEVYTKASVAACEERDPKQLYKKVRAGEI 155

HSP 2 Score: 41.2022 bits (95), Expect = 1.153e-15
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGLN +L F  EDR ENIRRI ++
Sbjct:   64 DNIRHGLNNNLGFSPEDRKENIRRIGEV 91

HSP 3 Score: 33.8834 bits (76), Expect = 1.153e-15
Identity = 17/43 (39.53%), Postives = 26/43 (60.47%), Query Frame = 2 
Query:  203 EGFTGIDDPYEPPLNCEIVLKQTGDDCPSPADMVETVVSYLDD 331
            + FTGID PYE P + EI++    +   S  + VE ++ YL+D
Sbjct:  156 KNFTGIDAPYEAPEDPEIIVDTEEN---SVEEAVEQIIQYLED 195
[Close]
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_MARAV (Adenylyl-sulfate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=cysC PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.941e-15
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 3 
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            DR   R + P G+FIEVFMD PL+ CE+RDPKGLYK AR G++
Sbjct:  110 DRRMVRKLFPAGEFIEVFMDAPLETCESRDPKGLYKKARAGEI 152

HSP 2 Score: 39.6614 bits (91), Expect = 1.941e-15
Identity = 17/28 (60.71%), Postives = 21/28 (75.00%), Query Frame = 1 
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL  DL F  +DRVENIRR+ ++
Sbjct:   61 DNVRHGLCSDLGFSDDDRVENIRRVGEV 88
The following BLAST results are available for this feature:
BLAST of FC923255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
KAP1_ARATH1.718e-2588.37Adenylyl-sulfate kinase 1, chloroplastic OS=Arabid... [more]
KAPS_CATRO4.045e-2486.36Adenylyl-sulfate kinase, chloroplastic OS=Catharan... [more]
KAP2_ARATH5.271e-2481.82Adenylyl-sulfate kinase 2, chloroplastic OS=Arabid... [more]
CYSC_ACAM11.036e-1958.14Adenylyl-sulfate kinase OS=Acaryochloris marina (s... [more]
CYSNC_XYLFA1.744e-1775.00Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSNC_XYLFT2.924e-1775.00Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSC_SHEDO5.303e-1660.47Adenylyl-sulfate kinase OS=Shewanella denitrifican... [more]
CYSC2_BACSU6.801e-1654.55Probable adenylyl-sulfate kinase OS=Bacillus subti... [more]
CYSC_STACT1.153e-1545.45Adenylyl-sulfate kinase OS=Staphylococcus carnosus... [more]
CYSC_MARAV1.941e-1562.79Adenylyl-sulfate kinase OS=Marinobacter aquaeolei ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31702G02EF StrClemenN Citrus clementina cDNA clone C31702G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923255 ID=FC923255; Name=FC923255; organism=Citrus clementina; type=EST; length=745bp
GACAACTGCCGGCATGGACTGAACCGTGATCTAAGTTTTAAGGCAGAAGA
TCGTGTGGAAAACATACGCAGGATTGAAAAGATCGAGATGCCTGCCGTTC
AATGTTGCCAGAAGGAGATTTCATTGAGGTGTTCATGGATGTGCCACTTC
AAGTGTGTGAGGCAAGGGACCCAAAGGGCCTTTACAAGCTTGCACGAGAA
GGGAAGGTTTTACTGGGATTGATGATCCATATGAACCACCATTAAACTGT
GAGATAGTACTAAAACAGACGGGAGATGACTGTCCTTCACCGGCTGATAT
GGTTGAAACTGTGGTATCTTACCTGGATGATAATGGCTTCCTGCGGGCCT
AATTTGAAGAGAAAGGTCTCAGCTCTTGGTTTCCATTGCCTTTGGTCACC
TGCAATACTTTGAGGTATCGACAAAAATCATGGTACGATCCAGTAAGGAA
ACTGATTGTTTCCTGCATCTGTAGCGACAATAAATGTCTGGCACTTTAAT
TACTCGATCGAGTAGTTGACGTCAGTGCCAAGCAAGTTGCATAGCGTTTC
GCGTCTTTAATTCAGGTTTGTTTTGGAATAAGTTATATGTTCATAGGGTT
GGGGATCGATGTAAATCAGTGTCATGCAGCATTAGAATAAAAGTTGTCTC
AGGTTTGCAAATTTCGATTGTACACGTACCCAACCCCGGCATCTTTGTAT
TACCATATTTGTGATAAGGAGCCAAGCTCTTACAGGCGTCTCATT
back to top