FC923258
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: C3H63_ARATH (Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis thaliana GN=ZFWD2 PE=2 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 1.872e-98 Identity = 164/222 (73.87%), Postives = 193/222 (86.94%), Query Frame = 1 Query: 1 QTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS------FAERGKIFAKQEIRAIQLGPGGLFFTGDGTGQVRVWQWCNGPVA 648 +TN D SLSGPVGQVY++ VG DLLFAGTQDG+ILAW++N TNCFEP+ASL GH+LAVV+L VGAN+LYSGSMD +I+VW+L+ LQCIQTLT+H+SVVMSL+CWDQ LLSCSLD T+K+W A + GNLEVTYTH EEHGVLALCG+ D+E KPVLLC+CNDN++R YDLPS F ERGKIFAKQEIRAIQ+GPGG+FFTGDGTGQV+VW+WC P A Sbjct: 219 ETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIRFTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQVKVWKWCTEPTA 440
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: C3H48_ARATH (Zinc finger CCCH domain-containing protein 48 OS=Arabidopsis thaliana GN=ZFWD1 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 4.171e-98 Identity = 162/210 (77.14%), Postives = 190/210 (90.48%), Query Frame = 1 Query: 1 QTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIRAIQLGPGGLFFTGDGTGQVRVWQW 630 Q N DLSL+GPVGQVY++ VG DLLFAGTQDG+IL W++N TT+CF+PAASL GH+LAVVSL VGAN+LYSG+MDNSI+VW+L+ LQCIQTLTEHTSVVMSL+CWDQ LLSCSLD T+K+W AT+ GNLEVTYTH EE+GVLALCG+ D+E KPVLLCSCNDNS+ YDLPSF ERGKI AKQEIR+IQ+GPGG+FFTGDG+GQV+VW+W Sbjct: 212 QNNADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKVWKW 421
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: C3H17_ORYSJ (Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=Os02g0677700 PE=2 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 5.276e-93 Identity = 158/210 (75.24%), Postives = 186/210 (88.57%), Query Frame = 1 Query: 1 QTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIRAIQLGPGGLFFTGDGTGQVRVWQW 630 QT +++L+GP GQVYA+AVGN+LLFA TQDG ILAW+F+ TN FEPAASL GH LAVVSLVVGA +LYS SMD +IRVW+L TLQCIQTL++HT VVMS+LCWDQ LLSCSLD+TIKVW AT+SG+LEVTYTH EEHG LAL GMPD++ KPVLLCS NDN+VR YDLPSF++RG+IF+KQEIRAIQ+GP GLFFTGDGTG+++VWQW Sbjct: 218 QTQAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASLVGHQLAVVSLVVGAMRLYSASMDKTIRVWDLATLQCIQTLSDHTGVVMSVLCWDQFLLSCSLDQTIKVWAATESGSLEVTYTHKEEHGALALSGMPDAQSKPVLLCSLNDNTVRLYDLPSFSDRGRIFSKQEIRAIQVGPSGLFFTGDGTGELKVWQW 427
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: C3H59_ARATH (Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis thaliana GN=ZFWD3 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.828e-54 Identity = 105/215 (48.84%), Postives = 143/215 (66.51%), Query Frame = 1 Query: 1 QTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVT-TNCFEPAASLKGH-SLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIRAIQLGPGGLFFTGDGTGQVRVWQWCNG 639 Q + D+ L G VGQV+AM N +LFAGT G+IL WK + ++ F+ SL+GH S V VVG LYSGS+D +I+VW+L TLQC TL +H V SLLCWD+ L+S SLD TIK+W +++ +L+V T +E V LCGM D+E KP++ CS + +V +DLPSF ERGK+F+ Q I + +GPGGL F+GD +G +RVW +G Sbjct: 255 QNSKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLPSFEERGKMFSTQTICTLTIGPGGLLFSGDKSGNLRVWSLASG 469
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: C3H62_ARATH (Zinc finger CCCH domain-containing protein 62 OS=Arabidopsis thaliana GN=ZFWD4 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.553e-52 Identity = 106/218 (48.62%), Postives = 141/218 (64.68%), Query Frame = 1 Query: 1 QTNTDLSL--SGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNC--FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEH-GVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIRAIQLGPGGLFFTGDGTGQVRVWQWCNG 639 QT+ DL L +G VGQV AM + N +LFAGT G+IL WK + F+ SL+GHS V VG LYSGS+D +I++W+L TLQCI TL +HT V SLLCWD+ L+S SLD TIKVW +++G L+V T +E V AL GM D+E KP++ CS + +V +DLPSF ERG++F+ I + +GP GL F+GD +G +RVW G Sbjct: 199 QTSQDLHLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHTIATLTIGPQGLLFSGDESGNLRVWTLAAG 416
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: MHCKB_DICDI (Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 52 MAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYT-HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSF 519 + + ++LLF G D +I + + + E +LKGH V S+ L+SGS D+SI+VW+L+ L+CI TL H V ++L D+ L S S DKTIKVW D LE YT + V LC L ND +++ +DL +F Sbjct: 466 LCICDNLLFTGCSDNSIRVYDYK--SQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVW---DLKTLECKYTLESHARAVKTLC-----ISGQYLFSGSNDKTIKVWDLKTF 612 HSP 2 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 53/154 (34.42%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 43 VYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFY 504 V + + LF+G+ D I W F +LKGH+ V ++ + LYSGS D +IRVWNL++L+C TL H V ++ D+LL + S D TIK+W D L T E H C + K V+ CS +D S+R + Sbjct: 585 VKTLCISGQYLFSGSNDKTIKVWDLKT----FRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIW---DLETLRCN-TTLEGHNATVQCLAVWEDKKCVISCS-HDQSIRVW 729 HSP 3 Score: 73.9442 bits (180), Expect = 9.211e-13 Identity = 50/167 (29.94%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 19 SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYT---HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 510 +L G V+ + + + LF+G+ D I W E +L+ H+ AV +L + L+SGS D +I+VW+L+T +C TL HT V ++ L S S DKTI+VW + +LE + T H+ + +C +L + +DN+++ +DL Sbjct: 537 TLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKT----LECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVW---NLKSLECSATLRGHDRWVEHMVIC-------DKLLFTASDDNTIKIWDL 689
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13 Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 22 LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVW 363 LSG V + + ++L +G+ D I W N+ T F+ A L+GHS V L KL SGSMD +IR+WN T +CI L HT V+ L LL+S S D T+K+W Sbjct: 269 LSGHSDGVMCLQLVRNILASGSYDATIRLW--NLAT--FQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLW 378 HSP 2 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 54/209 (25.84%), Postives = 93/209 (44.50%), Query Frame = 1 Query: 22 LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAV--VSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIRAIQLGPGGLFFTGDGTGQVRVWQWCNGP 642 L G V + + LL +G+ D + W F+ +L+GH+ V V ++ + SGS D++I++W+LET C+ T + H V SL D L SCSLD TIK W + + H E +A + L+ +D V+ ++ K + + + ++ LG + +G G++ +W + N P Sbjct: 349 LHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRI-----TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLR-------LISGAHDGVVKVWEACECVHTLKNHS-EPVTSVALGDCEV-VSGSEDGKIYLWLFNNAP 543
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: MHCKA_DICDI (Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12 Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 43 VYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGM 441 + +A+ LF+G D I W + F +++GH V+SL A+ L+S S DN I++W+L CI TL H + V S + D+ L S S D +IKVW D LE YT + H + C M Sbjct: 998 IKTLALSGRYLFSGGNDQIIYVWDTETLSMLF----NMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVW---DLDTLECVYTIPKSHSLGVKCLM 1123
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: FBXW7_HUMAN (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 48/163 (29.45%), Postives = 75/163 (46.01%), Query Frame = 1 Query: 22 LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 510 L G V V + + +G D + W T C +L+GH+ V SL + SGS+D SIRVW++ET CI TLT H S+ + D +L+S + D T+K+W L+ N+ + K ++ S +D +V+ +DL Sbjct: 497 LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-CLH---TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF----NKNFVITSSDDGTVKLWDL 651
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: TRAF7_MOUSE (E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus GN=Traf7 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 28 GPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVW 363 GPV + ++G DLLF+G+ D I W T C + +L+GH V++L + KLYSGS D +I VW+++ LQ + T+ H + V +L+ +L S SL K IKVW Sbjct: 321 GPVWCLCVYSMG-DLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSL-KAIKVW 427 The following BLAST results are available for this feature:
BLAST of FC923258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923258 ID=FC923258; Name=FC923258; organism=Citrus clementina; type=EST; length=713bpback to top |