FC923292

Overview
NameFC923292
Unique NameFC923292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3563 contig Ccv1_Contig3563:741..1485. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 69/182 (37.91%), Postives = 105/182 (57.69%), Query Frame = 3
Query:  168 SATSQDLSVQSGSDKTVESTGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELR-GEKAAIKKMDMQASRE--------FLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPL------PWSSRVQIALDSARGLEYIHEHTVP 665
            S+ S+ LS++    + +      +GT +  +A   DK+ EFS+ EL+ AT NFS+ +KIG G FG VY  +L  G + AIK+ ++ A  +        F +E+  L+ +HH +LVRL+GYC E     LVY+Y++NG L +HL               W  R++IALD+ARG+EY+H + VP
Sbjct:  447 SSNSRSLSIRRQGSRMLSMRRQRSGTSSMKHA---DKAEEFSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVP 625          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25
Identity = 65/148 (43.92%), Postives = 91/148 (61.49%), Query Frame = 3
Query:  240 GTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEKAAIKKMDMQAS----REFLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            G P   +  T  K   F+Y E+   TDNF     +G+GGFG VY+  L G +    K+  Q+S    +EF AE+++L  VHH+NLV L+GYC  E +L L+YEY  NG+L +HL G  G  PL WSSR++I +++A+GLEY+H    P
Sbjct:  549 GLPNRPSIFTQTK--RFTYSEVEALTDNFE--RVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKP 692          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25
Identity = 58/127 (45.67%), Postives = 87/127 (68.50%), Query Frame = 3
Query:  288 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELR-GEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIALDSARGLEYIH 650
            ++YEE++  T+NF     +G+GGFG VY+  +   E+ A+K +     Q  ++F AE+ +L  VHH+NLV L+GYC EG  L L+YEY+ NGNL +HL G + R PL W +R++IA ++A+GLEY+H
Sbjct:  581 YTYEEVAVITNNFE--RPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLH 705          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 3
Query:  249 TSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAEL-RGEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            +S  ++ ++    F+Y EL+ ATDNF+ S +IGQGG+G VY   L  G   AIK+     +Q  +EFL E+++L+ +HH NLV L+G+C  EG   LVYEY+ENG L +++    ++PL ++ R++IAL SA+G+ Y+H    P
Sbjct:  600 SSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANP 743          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25
Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 3
Query:  276 KSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMDM---QASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDP-LPWSSRVQIALDSARGLEYIHEHTVP 665
            KS  F+Y E+ + T NF     +G+GGFG VY+  ++G E+ A+K +     Q S+EF AE+ +L  VHH NLV L+GYC EG  L LVYE++ NG+L +HL G G +  + WS R++IAL++A GLEY+H    P
Sbjct:  550 KSKRFTYSEVVQVTKNFQ--RVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTP 683          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 62/139 (44.60%), Postives = 91/139 (65.47%), Query Frame = 3
Query:  270 VDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVPV 668
            V K+ +F+Y E+   T+NF     +G+GGFG VYY  + G E+ A+K +     Q  ++F AE+++L  VHH NLV L+GYC EG  L L+YEY+ NG+L EH+ G  G   L W +R++IAL++A+GLEY+H    P+
Sbjct:  561 VTKNKKFTYAEVLTMTNNFQKI--LGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPL 697          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 3
Query:  276 KSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMDMQAS---REFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            K + F+Y E+ + T+NF  +  +G+GGFG VY+  +   E+ A+K +   +S   + F AE+++L  VHH+NLV L+GYC EG  L L+YEY+ NG+L +HL G  G   L W SR++I LD+A GLEY+H   VP
Sbjct:  563 KKIRFTYSEVQEMTNNFDKA--LGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVP 696          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 3
Query:  222 STGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELR-GEKAAIKK---MDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIH 650
            S G      T+L +IT + +    +  +  AT+NF  S  IG GGFG VY  EL  G K A+K+      Q   EF  E+++L+   H +LV LIGYC E + + L+YEY+ENG +  HL GSG   L W  R++I + +ARGL Y+H
Sbjct:  451 SMGSKYSNGTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLH 598          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.935e-24
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 3
Query:  258 NAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            N   + K    +Y E+ K T+NF     +G+GGFG VY+  L   + A+K +     Q  +EF AE+++L  VHH NLV L+GYC +G +L L+YEY+ NG+L E++ G  G + L W +R+QIA+++A+GLEY+H    P
Sbjct:  546 NPSIITKERRITYPEVLKMTNNFE--RVLGKGGFGTVYHGNLEDTQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTP 684          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.935e-24
Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  276 KSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMDM---QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLF-LVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            K   F+Y E+ + T N  +   +G+GGFG VY+ +L G E+ A+K +     Q  +EF AE+++L  VHH+NLV L+GYC E   F L+YEY+ NG+L +HL G  G   L W +R+QIA+++A GLEY+H    P
Sbjct:  552 KKKRFTYSEVMEMTKN--LQRPLGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKP 685          
The following BLAST results are available for this feature:
BLAST of FC923292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
ACCR3_ARATH2.700e-2637.91Putative serine/threonine-protein kinase-like prot... [more]
Y2289_ARATH2.286e-2543.92Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH2.985e-2545.67Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH2.985e-2542.36Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH2.985e-2546.32Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y5181_ARATH5.092e-2544.60Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH6.650e-2544.85Probable leucine-rich repeat receptor-like protein... [more]
HERK_ARATH6.650e-2541.22Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5188_ARATH1.935e-2441.84Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH1.935e-2444.12Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31703C06EF StrClemenN Citrus clementina cDNA clone C31703C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923292 ID=FC923292; Name=FC923292; organism=Citrus clementina; type=EST; length=745bp
CAGATGCAAATGGTGTCTTTCCGGCCCTGGAGTCATCAAGCACAGGAATA
GCTGGTGGAGCTATTGCTGGCATATCTATAGCAGGAGTAGCTGGGTTGGC
TTTGCTTGCAGTTTGTGTGTATGTTGGATTTTACCGAAAGAAGAGGGTGA
AGAGGGCAGCATTGCTCTCAGCCACATCTCAAGATCTTTCCGTTCAGTCT
GGATCTGATAAAACTGTGGAATCTACTGGTCCAGCTGCTGGCACTCCCAC
ATCCCTTAATGCAATCACTGTGGACAAGTCGGTGGAATTCTCATATGAAG
AACTTTCCAAGGCAACTGATAATTTCAGTATGTCCCATAAAATTGGTCAA
GGTGGTTTTGGAGCTGTTTACTATGCAGAGCTGAGAGGAGAGAAAGCTGC
TATAAAAAAGATGGATATGCAAGCATCGAGGGAATTTCTTGCTGAATTGA
AGGTTCTAACGCACGTTCATCACTTGAACTTGGTGCGCCTAATTGGATAC
TGTGTTGAAGGTTCTCTTTTCCTTGTTTATGAATACATTGAGAATGGCAA
CTTAAGCGAACATTTACGTGGATCAGGTAGGGATCCTCTGCCATGGTCTT
CTAGGGTGCAAATTGCTCTTGATTCAGCAAGAGGTCTGGAGTATATTCAT
GAGCACACAGTCCCTGTTTATATCATCGGGATATTAATCAGCAATATATT
GATAGACAGAACTTCCATGCAAGGTGCTGACTTGGATTACGAACT
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