FC923293

Overview
NameFC923293
Unique NameFC923293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14512 contig Ccv1_Contig14512:57..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI196_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp. japonica GN=DI19-6 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.836e-31
Identity = 73/174 (41.95%), Postives = 100/174 (57.47%), Query Frame = 1
Query:  202 TDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAMLGK-ELSSFLGSPTIVRGN-APESLPDPLLSPFLC---SGTLSDTKGIQKDDCTNKFSLASDLKSAGGTLLDDGHEENIEEK 708
            T N  +  E   DD+     PCPFCY+E+E H +C HLQEEHCF+MKNAVCP+CA NL KD  EHF VQH+  LKRR+    S   +  +A  G  E  S+  +P+   G  AP+S PDPLLS F+C   +  +   +  + D   +  S + D K     ++DD  +E +EE+
Sbjct:   18 TINFQMYSEIAGDDEWWEYIPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHFRVQHSHLLKRRKSSSFSCKPSSAAADKGSYEEDSYFEAPSHCMGRPAPDSSPDPLLSQFICCSLAPPVDSPRRSEADAEGHGSSSSDDQKRREQGVMDDASKEELEER 191          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI195_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp. japonica GN=DI19-5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25
Identity = 62/153 (40.52%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  259 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAMLGKELSSFLGSPTIVRGNA--PESLPDPLLSPFLCSGTLSDTKGIQKDDCTNKFSLASDLK-SAGGTLLDDGHEENIEEK 708
            FPCPFCY+E+E   IC+HLQEEHCF+ +NAVCPLCA N+G+D   HF VQH+  LKRR+    S   +            F G P  +  N    +  PDPLLS F+CS   +DT     +      +++ D + S   TL DD  +  ++E+
Sbjct:   37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHLLKRRKPSRPS---SSWPTPSNNSDPYFEGPPQYMMNNRTYQDPAPDPLLSQFICSMAQTDTNSDNTNTEIAVSAVSHDQRLSQRVTLTDDASKLELKER 186          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18
Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = 1
Query:  127 MDIDFWASRVHSA-KHFSAVRASRLNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAML---------GKELSSFLGSPTIVRGNAPESLPDPLLSPFLCSGTLSDTKGIQKDDCTNKFSLASDLKSAGGTLLDDGHEENIEEK 708
            MD D W+ R+ SA + +     SR  +DN    +E E +DD +  + CPFC    +   +C H+ E+H  + KN VCP+CA  +  D   H  +QHA+  K  RK  +   R G  +ML         G   S F G+   V  ++     DPLLS F+          +  D   ++ SL +D  SA  TL     E N+E++
Sbjct:    1 MDSDSWSDRLASASRRYQLDFLSR--SDNFLGFEEIEGEDDFREEYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRK--RKSRRGGAQSMLSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFI--------SPMADDFFISESSLCADTSSAKKTLNQSLPERNVEKQ 192          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = 1
Query:  127 MDIDFWASRVHSAKHFSAVRASRLNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSA--MLGKELSS-----FLGSPTIVRGNAPESL---PDPLLSPFLCSGTLSDTKGIQK 612
            MD + W SR+ +AK F A   ++L   + + ++E ++D++V+  F CP+CY + +   +C+HL+EEH FE   A CP+C+  + KD   H  VQH    K RR+ L+  +  G  A  +L ++L        LG       N+  +     DPLLS F  S   SDT+   K
Sbjct:    1 MDSEHWISRLAAAKRFYA---AQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRR-LRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSK 168          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 1
Query:  127 MDIDFWASRVHSAK----------HFSAVRASRLNTDNHSIVD-----ETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHA--------SSLKRRRKCLKSGLRNGGSAMLGKELSSFLGSPTIVRG-NAPESLPDPLLSPFLCSGTLSDTKGIQK 612
            MD D W SR+ +AK          H  A   +     +HS +D     + E +D+V+  FPCP+CY + +   +C+HL++EH FE K   CP+C+A + KD  +H  +QH+          L+R        L  GG  +    L   LG+ +   G NA  S+ D LLS  + + + S+ +   K
Sbjct:    1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDFPCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAASSVTDSLLSSLVLNLSSSEAEDTAK 186          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  220 VDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAMLG--------KELSSFLGSPTIVRGNAPESLPDPLLSPFLCSGTLSD-TKGIQKDDCTNKFSL 639
            V+E E     +A + CPFC  + +    C H+ +EH  E K+ VCP+CA  +G D   H  +QH S  K +R+     + +G  ++L           L SFLG  + V  N P + PDP LS  +CS  +++ +K +  D   N F L
Sbjct:   42 VEEVEARGGGEA-YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYV-SNPPAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLL 188          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  223 DETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHAS--SLKRRRKCLKSGLRNGGSAMLGKE-----LSSFLGSPTIVRGNAPESLPDPLLSPFL 573
            +E + DDD +  F CPFC    +   +C H+ +EH  E KNAVCP+C+  +G D   H  + H S   L+R+RK  KSG  N   ++L KE     L   LG  +     A    PDPLLS F+
Sbjct:   23 EEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSG-TNSTLSLLRKELREGDLQRLLGFTSRNGSVASSVTPDPLLSSFI 145          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  127 MDIDFWASRVHSA-KHFSAVRASRLNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGS----AMLGKEL------SSFLGSPTIVRGNAPESL-PDPLLSPFL 573
            MD D W+ R+ SA + +     SR  +D     +E + +++ +  F CPFC    +   +C H+ E+H  E KN VCP+CA  +G D   H  +QHA+  K  R   K   R GGS    ++L +E       S F GS  IV  ++  ++  DPLLS F+
Sbjct:    1 MDSDSWSDRLASATRRYQLAFPSR--SDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHR---KRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFI 156          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.467e-14
Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  127 MDIDFWASRVHSAKHFSAVRASRLNTDNHSI-VDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLK-RRRKCLKSGLRNGGSAMLGKE-----LSSFLGSPTIVRGNAPESLPDPLLSPFL 573
            MD + W   ++    FS+  +SR       + + + E +DD+KA F CPFC  E +   +C H+   H  E KN VCP+C   +G D   H   QH +  K +RR+ L+ G  +     L KE     L S  GS T +  +  +S  DPLLS F+
Sbjct:    1 MDSNSW---INCPPVFSSSPSSRRYQSRSDLYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQSLGGSSTFIPSSNIDS--DPLLSSFM 151          
BLAST of FC923293 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.106e-13
Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  223 DETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLK-RRRKCLKSGLRNGGSAMLGKEL------SSFLGSPTIVRGNAPESLPDPLLSPFL 573
            ++ E +DD+KA F CPFC  + +   +C H+ EEH  E KN VCP+C   +G D   H   QHA+  K +RR+ L+ G  +     L KEL      S   GS +       +S  DPLLS F+
Sbjct:   35 EDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDS--DPLLSSFM 156          
The following BLAST results are available for this feature:
BLAST of FC923293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DI196_ORYSJ5.836e-3141.95Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza ... [more]
DI195_ORYSJ4.785e-2540.52Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza ... [more]
DI196_ARATH2.543e-1831.37Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabid... [more]
DI191_ORYSJ9.665e-1833.72Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa sub... [more]
DI194_ORYSJ2.812e-1730.65Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza ... [more]
DI192_ORYSJ9.046e-1632.89Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza ... [more]
DI191_ARATH2.632e-1538.71Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thal... [more]
DI193_ARATH4.489e-1534.16Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabid... [more]
DI197_ARATH8.467e-1433.97Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabid... [more]
DI194_ARATH1.106e-1337.90Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC31703C08EF StrClemenN Citrus clementina cDNA clone C31703C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923293 ID=FC923293; Name=FC923293; organism=Citrus clementina; type=EST; length=718bp
GACACACGCCACAATCTAATCGTCATCTCTCAGTGCATAGCAGCATCAGT
CCTTGACTCTGTTACCGGAACCTGACGTTTATCGCCGGTTAAAGCTGACG
TGTGCACCCAGTAAGCTGATACCATCATGGACATTGACTTCTGGGCTTCG
AGAGTCCACTCTGCTAAGCACTTCTCTGCTGTTCGAGCTTCACGACTCAA
CACCGATAATCATTCAATAGTGGATGAAACAGAAATAGATGATGATGTAA
AAGCTTGCTTTCCGTGCCCCTTCTGTTATCTTGAAATTGAAGCTCACATG
ATCTGTAGCCATTTGCAGGAAGAGCACTGCTTTGAAATGAAAAATGCAGT
TTGTCCTCTGTGCGCAGCAAACCTAGGAAAAGATGCTGCTGAACATTTTA
TGGTACAACATGCTAGTTCGTTAAAGCGCAGGAGAAAATGTCTGAAATCT
GGCCTCAGGAATGGTGGTTCAGCAATGCTTGGCAAGGAACTGAGCTCGTT
TCTTGGTTCACCCACAATTGTTAGGGGAAATGCTCCTGAATCTCTACCTG
ATCCGCTGCTATCACCATTTCTCTGCAGTGGAACTCTTTCAGACACCAAA
GGTATCCAGAAAGATGATTGTACCAATAAGTTCTCTTTAGCTTCGGATTT
GAAAAGTGCCGGGGGAACTTTGCTAGACGATGGGCATGAAGAGAACATTG
AAGAAAAATGCAGAGAGC
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