FC923301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.366e-26 Identity = 56/73 (76.71%), Postives = 58/73 (79.45%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 221 ESADNELKGILSVCDEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+ Sbjct: 329 ESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 401
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 6.777e-26 Identity = 55/73 (75.34%), Postives = 57/73 (78.08%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 221 +SA+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 324 DSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 396
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.156e-25 Identity = 55/73 (75.34%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 221 E+AD ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN WK Sbjct: 320 EAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 392
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.510e-25 Identity = 54/73 (73.97%), Postives = 57/73 (78.08%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 221 ++A+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 161 DAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 233
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.363e-25 Identity = 55/73 (75.34%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 221 ESA EL GILSVCDEPLVSVDFRC MGDD+VKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 333 ESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 405
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.846e-23 Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 218 ++AD LKG+L+VCDEPLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VANNW Sbjct: 320 KAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNW 391
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.196e-22 Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 221 ++A NEL GIL VCD PLVSVDFRC MGDDMVKVI+WYDNEWGYSQRVVDLADI AN WK Sbjct: 331 DAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQWK 403
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.727e-21 Identity = 47/72 (65.28%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 218 ++A+ LKGIL VCD PLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VAN W Sbjct: 351 KAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.573e-21 Identity = 46/72 (63.89%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 218 ++A LKG+L VCD PLVSVDFRC MG DMVKV+AWYDNEWGYSQRVVDLAD+VAN W Sbjct: 350 KAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKW 421
BLAST of FC923301 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.120e-20 Identity = 45/72 (62.50%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 3 ESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 218 ++A+ +KGIL VCD PLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VA+ W Sbjct: 347 KAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418 The following BLAST results are available for this feature:
BLAST of FC923301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923301 ID=FC923301; Name=FC923301; organism=Citrus clementina; type=EST; length=433bpback to top |