FC923316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT11_SOLLC (Ammonium transporter 1 member 1 OS=Solanum lycopersicum GN=AMT1-1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.119e-35 Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATT 278 PGRP+GLFMGGGGKLL AH+IQILV+ GWVSATMGPLF+ILHK KLLRIS EDEMAGMDLTRHGGFAY YH++D G+Q+R+IEPT +T Sbjct: 400 PGRPHGLFMGGGGKLLGAHIIQILVIIGWVSATMGPLFYILHKFKLLRISSEDEMAGMDLTRHGGFAY-YHEED--PKLGMQMRRIEPTTST 488
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT11_ARATH (Ammonium transporter 1 member 1 OS=Arabidopsis thaliana GN=AMT1-1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.554e-34 Identity = 68/94 (72.34%), Postives = 80/94 (85.11%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPS 284 PGRP+GLFMGGGGKLL A +IQI+V+ GWVSATMG LFFIL K+KLLRIS EDEMAGMD+TRHGGFAY+Y DDD+ IQLR++EP + +PS Sbjct: 400 PGRPHGLFMGGGGKLLGAQLIQIIVITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDE-SHKAIQLRRVEPRSPSPS 492
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT12_SOLLC (Ammonium transporter 1 member 2 OS=Solanum lycopersicum GN=AMT1-2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.855e-33 Identity = 64/93 (68.82%), Postives = 78/93 (83.87%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS-NGIQLRKIEPTATT 278 P RPYGLFMGGGGKLL A VIQ++V+ GWVS TMGPLF++LHK KLLRIS +DE AGMDLTRHGGFAY+YHD+D+ S G ++ ++EPT T+ Sbjct: 409 PNRPYGLFMGGGGKLLGAQVIQVVVIIGWVSVTMGPLFYLLHKFKLLRISRDDETAGMDLTRHGGFAYIYHDEDEGSSMPGFKMTRVEPTNTS 501
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT11_ORYSJ (Ammonium transporter 1 member 1 OS=Oryza sativa subsp. japonica GN=AMT1-1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.270e-32 Identity = 69/101 (68.32%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 6 GRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGI---QLR----KIEPTATTPSS 287 GRPYGLFMGGGGKLLAAHVIQILV+ GWVS TMGPLF+ L KL LLRIS EDE +GMDLTRHGGFAYVYHD+D+ +G+ LR ++EP A S+ Sbjct: 393 GRPYGLFMGGGGKLLAAHVIQILVIFGWVSCTMGPLFYGLKKLGLLRISAEDETSGMDLTRHGGFAYVYHDEDEHDKSGVGGFMLRSAQTRVEPAAAAASN 493
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT12_ARATH (Ammonium transporter 1 member 2 OS=Arabidopsis thaliana GN=AMT1-2 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.038e-31 Identity = 63/96 (65.62%), Postives = 79/96 (82.29%), Query Frame = 3 Query: 9 RPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSN--GIQLRKIEPT--ATTPS 284 RPYGLFMGGGGKLLAA ++QI+V+ GWV+ TMGPLF+ LHK+ LLRIS EDEMAGMD+TRHGGFAY Y+D+DDV + G ++EPT ++TP+ Sbjct: 414 RPYGLFMGGGGKLLAAQIVQIIVIVGWVTVTMGPLFYGLHKMNLLRISAEDEMAGMDMTRHGGFAYAYNDEDDVSTKPWGHFAGRVEPTSRSSTPT 509
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT13_ARATH (Ammonium transporter 1 member 3 OS=Arabidopsis thaliana GN=AMT1-3 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30 Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSSV 290 PGRPYGLFMGGGGKLL A ++QILV+ GWVSATMG LFFIL +L LLRIS + EM GMD+TRHGGFAY+YHD+DD +S+ + P + TP V Sbjct: 404 PGRPYGLFMGGGGKLLGAQLVQILVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYIYHDNDD-ESHRVDPGSPFPRSATPPRV 498
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT12_ORYSJ (Ammonium transporter 1 member 2 OS=Oryza sativa subsp. japonica GN=AMT1-2 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.586e-29 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 224 PGRPYGLFMGGGG+LL AH++ ILV+A WVS TM PLF +L+KL LLRIS EDEMAGMD TRHGGFAY YHDDD Sbjct: 393 PGRPYGLFMGGGGRLLGAHIVVILVIAAWVSFTMAPLFLVLNKLGLLRISAEDEMAGMDQTRHGGFAYAYHDDD 466
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT15_ARATH (Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana GN=AMT1-5 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.318e-28 Identity = 62/96 (64.58%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSSV 290 PGR YGLFMGGGGKLL A ++QI+V+ GWVSATMG LFFIL KL LLRIS + EM GMDL HGGFAY+YHD+DD S G+ + P A P +V Sbjct: 403 PGRHYGLFMGGGGKLLGAQLVQIIVIVGWVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAYIYHDNDD-DSIGVPGSPV-PRAPNPPAV 496
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT14_ARATH (Ammonium transporter 1 member 4 OS=Arabidopsis thaliana GN=AMT1-4 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.086e-27 Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKI 260 P RP+GL MGGGG+LLAAHV+QILV+ GWVS TMG LFFILHKLKLLRI EDE+AG+D T HGG AY+Y +D+ NGI +R++ Sbjct: 411 PNRPFGLLMGGGGRLLAAHVVQILVITGWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSHGGLAYMYTEDE--IRNGIMVRRV 494
BLAST of FC923316 vs. ExPASy Swiss-Prot
Match: AMT13_ORYSJ (Ammonium transporter 1 member 3 OS=Oryza sativa subsp. japonica GN=AMT1-3 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.676e-26 Identity = 54/91 (59.34%), Postives = 69/91 (75.82%), Query Frame = 3 Query: 3 PGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ---SNGIQLRKIEP 266 PGRPYGLFMGGGG+LLAAH++QILV+ GWVSATMG LF++LH+ LLR+SP EM GMD T HGGF YV D+ + + + + ++EP Sbjct: 395 PGRPYGLFMGGGGRLLAAHIVQILVIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYVDEDEGERRVRAKSAAETARVEP 485 The following BLAST results are available for this feature:
BLAST of FC923316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923316 ID=FC923316; Name=FC923316; organism=Citrus clementina; type=EST; length=562bpback to top |