FC923318

Overview
NameFC923318
Unique NameFC923318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15265 contig Ccv1_Contig15265:210..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 4.765e-112
Identity = 194/206 (94.17%), Postives = 199/206 (96.60%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCRSIGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPEEIGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 3.089e-111
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTKANVDYEKIVRDTCR+IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 400.593 bits (1028), Expect = 4.034e-111
Identity = 191/206 (92.72%), Postives = 200/206 (97.09%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACLAQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGA VP+RVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.268e-111
Identity = 191/206 (92.72%), Postives = 199/206 (96.60%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEY+N+ GARVP+RVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 6.880e-111
Identity = 193/206 (93.69%), Postives = 200/206 (97.09%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQV+DAVLDACLAQDPDSKVACETCT+TNMVMVFGEITTKANVDYE+IVRDTCRSIGFTSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYN NGA VPVRVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.174e-110
Identity = 191/206 (92.72%), Postives = 198/206 (96.12%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTV+ISTQHDETVTND+IAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 3.415e-110
Identity = 190/206 (92.23%), Postives = 200/206 (97.09%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA++DYEKIVRDTCR+IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEY+NENGA VP+RVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 3.415e-110
Identity = 190/206 (92.23%), Postives = 199/206 (96.60%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTKANVDYEKIVRDTCR+IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRK+GTCPWLRPDGKTQVTVEYYN+ GA VPVRVHTVLISTQHDETVTNDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.460e-110
Identity = 192/206 (93.20%), Postives = 198/206 (96.12%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQV+DAVLDACLAQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGFTSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNG C WLRPDGKTQVTVEYYN+NGA VPVRVHTVLISTQHDETV+NDEIAADLK
Sbjct:    6 FTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAEVDYEKIVRDTCRSIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDEIAADLK 211
[Close]
BLAST of FC923318 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 5.825e-110
Identity = 191/206 (92.72%), Postives = 199/206 (96.60%), Query Frame = 2 
Query:    8 FTSE*ANEGHADRLCDQVADAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK 625
            FTSE  NEGH D+LCDQ++DAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCR+IGFTS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLK
Sbjct:    7 FTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLK 212
The following BLAST results are available for this feature:
BLAST of FC923318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CARPA4.765e-11294.17S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK1_ELAUM3.089e-11193.20S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK2_CATRO4.034e-11192.72S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK2_VITVI5.268e-11192.72S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK_LITCN6.880e-11193.69S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK1_CATRO1.174e-11092.72S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK5_VITVI3.415e-11092.23S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK2_ELAUM3.415e-11092.23S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_BETVU4.460e-11093.20S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_POPDE5.825e-11092.72S-adenosylmethionine synthetase OS=Populus deltoid... [more]

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Properties
Property NameValue
Genbank descriptionC31703F08EF StrClemenN Citrus clementina cDNA clone C31703F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923318 ID=FC923318; Name=FC923318; organism=Citrus clementina; type=EST; length=686bp
TGTCTGTTTCACATCAGAATGAGCGAACGAGGGTCACGCGGACAGGCTGT
GTGACCAAGTTGCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCT
GACAGCAAAGTTGCATGTGAAACATGCACAAAGACCAACATGGTCATGGT
TTTTGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGC
GTGATACATGCAGATCGATTGGGTTCACATCGGACGATGTGGGGCTTGAT
GCTGATCACTGCAAAGTTCTTGTTAATATTGAACAGCAGAGCCCTGACAT
TGCTCAGGGTGTCCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTG
CTGGAGATCAGGGTCACATGTTTGGTTACGCCACTGATGAGACTCCTGAG
TTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGTGCTAAGCTTAC
AGAAGTGAGGAAGAATGGGACCTGTCCATGGCTGAGGCCAGATGGCAAAA
CACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCAGGGTTCCTGTT
CGTGTCCATACTGTGCTTATCTCAACTCAGCACGATGAGACTGTAACTAA
TGATGAGATTGCTGCAGATCTCAAGCACATGTGATCAAGCCGTGATTCTG
ACAGTACTGGATGACAAACTATTTTCATCTTACCAT
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