FC923320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.468e-20 Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAV 349 L+RPGRFDR+IFIPKP + GR EILKVHAR K +A DVD VA T G GA+L N++ AA+ R G+ EIT +++ +A G L+RK SP+ ++AI+EA A++ + Sbjct: 311 LLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMG-LERKGMTISPKEKEKIAIHEAGHALMGL 427
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17 Identity = 50/119 (42.02%), Postives = 77/119 (64.71%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGM--LDRKER--SPETWRQVAINEAAMAVVA 346 L+RPGRFDR++ + KP GR+EILKVH + +A+DVD +A +T G+ GA+LANI+ AA+ R+ + E+ L +A ERG+ L++K R SP+ + VA +E+ AV++ Sbjct: 333 LLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAV---ERGIAGLEKKSRRISPKEKKIVAYHESGHAVIS 448
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.491e-16 Identity = 50/119 (42.02%), Postives = 77/119 (64.71%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGM--LDRKER--SPETWRQVAINEAAMAVVA 346 L+RPGRFDR++ + KP GR+EILKVH + +A+DV+ VA +T G+ GA+LANI+ AA+ R+ + E+ L +A ERG+ L++K R SP+ + VA +E+ AV++ Sbjct: 327 LMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAV---ERGIAGLEKKSRRISPKEKKIVAYHESGHAVIS 442
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.491e-16 Identity = 50/119 (42.02%), Postives = 77/119 (64.71%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGM--LDRKER--SPETWRQVAINEAAMAVVA 346 L+RPGRFDR++ + KP GR+EILKVH + +A+DV+ VA +T G+ GA+LANI+ AA+ R+ + E+ L +A ERG+ L++K R SP+ + VA +E+ AV++ Sbjct: 327 LMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAV---ERGIAGLEKKSRRISPKEKKIVAYHESGHAVIS 442
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.666e-16 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 283 ++RPGRFDR I +P P L GR+EIL +H RK MA DVD A+A +T+G GA+L +V A N +R G IT DD+++A + + + LD++ Sbjct: 295 VLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVE-KVKAALDKR 387
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.400e-16 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER----SPETWRQVAINEAAMAVVAVN 352 LVRPGRFDR I +P P + GR +IL+ H K +DDVD + +A T G GA+LAN+V VAA+ DG +T +DL A ++R M+ + + S E+ + A +E A+VA++ Sbjct: 382 LVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYA---KDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIH 499
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 7.400e-16 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER----SPETWRQVAINEAAMAVVAVN 352 LVRPGRFDR I +P P + GR +IL+ H K A+DVD + +A T G GA+LAN+V VAA+ DG ++T DL A ++R M+ + + S E+ + A +E A+VA++ Sbjct: 379 LVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFA---KDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIH 496
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.664e-16 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER----SPETWRQVAINEAAMAVVAVN 352 LVRPGRFDR I +P P + GR +IL+ H K +DDVD + +A T G GA+LAN+V VAA+ DG +T +DL A ++R M+ + + S E+ + A +E A+VA++ Sbjct: 375 LVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYA---KDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIH 492
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAV 349 L+RPGRFDRK+ + +P + GR ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+ +A G + + + R+ VA +EA +V + Sbjct: 342 LLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGL 458
BLAST of FC923320 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAV 349 L+RPGRFDRK+ + +P + GR ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+ +A G + + + R+ VA +EA +V + Sbjct: 342 LLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGL 458 The following BLAST results are available for this feature:
BLAST of FC923320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923320 ID=FC923320; Name=FC923320; organism=Citrus clementina; type=EST; length=563bpback to top |