FC923321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOS11_ARATH (Golgi SNARE 11 protein OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 2.400e-86 Identity = 163/198 (82.32%), Postives = 178/198 (89.90%), Query Frame = 2 Query: 83 MDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQILSS*RGK 676 MDVPSSWDALRKQARK+EAQLDEQMHSYR+LVS+K +K D E+DLE+GID LL+QLQQVN QMQ WVSSGGSEMVSHTLTRHQEILQDLTQEFYR RSSL+AKQEHASLLEDFREFDRTRLDLEDG GS EQAL+KEH INR+T QMD VISQAQATLG L FQRSTFGGINSKLSNV+SRLP+VN IL++ + K Sbjct: 1 MDVPSSWDALRKQARKIEAQLDEQMHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDRTRLDLEDGYGS-EQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGINSKLSNVASRLPTVNTILAAIKRK 197 HSP 2 Score: 26.5646 bits (57), Expect = 2.400e-86 Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 666 KEEKSMDTIILALVAS 713 K +KSMDTIIL+LVA+ Sbjct: 195 KRKKSMDTIILSLVAA 210
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOS12_ARATH (Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.803e-23 Identity = 72/216 (33.33%), Postives = 115/216 (53.24%), Query Frame = 2 Query: 77 SAMDVPSS-WDALRKQARKLEAQLDEQMHSYRKLVS--------SKGSTKVDAAEN--DLESGIDWLLKQLQQVNIQMQDWVSSGG-SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLED----GVGSPEQALLKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQILSS*RGK 676 S++D+ S W+ LR++ARK+E LD ++ SY KL + GS V + + +E I LL++L +N M +S + V+ L RH++IL + TQEF R++ ++ + +EHA LL R+ D+ + G SP +L+E A+I+ S +D VI QAQAT L QRS F + K+ N+ + P + +L S + K Sbjct: 4 SSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHAELLSSVRD------DISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRK 213
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_HUMAN (Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18 Identity = 67/219 (30.59%), Postives = 108/219 (49.32%), Query Frame = 2 Query: 80 AMDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 A S W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT + QR I+SK++ +++R P+VN ++ Sbjct: 2 AAGTSSYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLI 219
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_BOVIN (Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18 Identity = 65/212 (30.66%), Postives = 105/212 (49.53%), Query Frame = 2 Query: 101 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L +N +M ++ SS G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT + QR I SK++ +++R P+VN ++ Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFVAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIQSKMNTLANRFPAVNSLI 219
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_CRIGR (Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18 Identity = 65/212 (30.66%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 101 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT + QR I+SK++ +++R P+VN ++ Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLI 219
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_RAT (Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 65/212 (30.66%), Postives = 105/212 (49.53%), Query Frame = 2 Query: 101 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT + QR I+SK++ +++R P+VN ++ Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLI 219
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_PONAB (Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 63/210 (30.00%), Postives = 106/210 (50.48%), Query Frame = 2 Query: 101 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAEND-------------------LESGIDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 W+ LRKQAR+LE +LD ++ S+ KL +S + D + I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ + +E +L+ R+ D GV + L LKEH + S ++ IS A AT + QR I+SK++ +++R P+VN ++ Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMSIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLI 217
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_MOUSE (Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 66/212 (31.13%), Postives = 107/212 (50.47%), Query Frame = 2 Query: 101 WDALRKQARKLEAQLDEQMHSYRKLVSSK--------GSTKVDAAENDLESG-------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 W+ LRKQAR+LE +LD ++ S KL +S G + + L +G I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT + QR I+SK++ +++R P+VN ++ Sbjct: 9 WEDLRKQARQLENELDLKLVSSSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFTAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLI 219
BLAST of FC923321 vs. ExPASy Swiss-Prot
Match: GOSR1_DROME (Probable 28 kDa Golgi SNARE protein OS=Drosophila melanogaster GN=Gos28 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 60/208 (28.85%), Postives = 102/208 (49.04%), Query Frame = 2 Query: 95 SSWDALRKQARKLEAQLDEQMHSYRKLVS------SKGSTKVDAAE-------NDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSP-------EQALLKEHATINRSTGQMDSVISQAQATLGALAFQRSTFGGINSKLSNVSSRLPSVNQIL 658 SS+D LRKQAR LE ++D ++ ++ K+ + S G VD + + L I+ +L++L +N M D +SG + M HTL RH+EILQ QEF ++ ++ + E LL L GSP + LKE +N ++ ++ I+ A T L QR F + ++ +++S+R P ++ ++ Sbjct: 4 SSYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDTSPLLGEHVFDSLSEEIEQMLEKLSSLNESMSDLPASGAAAM--HTLQRHREILQGYRQEFNKICANHTMRIEREELLRG--------SGLATSSGSPSISGLNRREMYLKESGHLNSASHLVNDQINIAIETRDHLHAQRQAFKRLQTRFNDISNRFPLISSLI 201 The following BLAST results are available for this feature:
BLAST of FC923321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923321 ID=FC923321; Name=FC923321; organism=Citrus clementina; type=EST; length=715bpback to top |