FC923356

Overview
NameFC923356
Unique NameFC923356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5N_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana GN=B'ETA PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.033e-86
Identity = 153/181 (84.53%), Postives = 165/181 (91.16%), Query Frame = 1
Query:    7 MYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKAA 549
            MYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNS+KEVMFL ELEEVLE+TQP EFQRCMVPLF QI RCL+S HFQVAERALFLWNN+HIENLI QNRKVILPIIFPALERNA+KHWNQAV SLTLNVRKIF D+DPELF+ECL KF+EDE+K  E + KREATWKRLEE+   KA+
Sbjct:  330 MYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSSKEVMFLNELEEVLEATQPPEFQRCMVPLFRQIARCLNSLHFQVAERALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSLTLNVRKIFHDLDPELFKECLAKFKEDESKAAETEAKREATWKRLEELGVRKAS 510          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5T_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana GN=B'THETA PE=2 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 6.541e-85
Identity = 152/183 (83.06%), Postives = 164/183 (89.62%), Query Frame = 1
Query:    7 MYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKAASN 555
            MYHQQLSYCITQFVEKDCKLADTVIRGLLK WPVTNS+KEVMFL ELEEVLE+TQP EFQRCMVPLF Q+ RCL+S HFQVAERALFLWNNDHIENLI QNRKVILPIIFPALERN +KHWNQAV SLTLNV+KIF+DID ELF++CL KF+EDE+KE EI  KREATWKRLEEI   K  S+
Sbjct:  309 MYHQQLSYCITQFVEKDCKLADTVIRGLLKSWPVTNSSKEVMFLNELEEVLEATQPPEFQRCMVPLFRQVARCLNSLHFQVAERALFLWNNDHIENLIMQNRKVILPIIFPALERNTQKHWNQAVHSLTLNVQKIFNDIDAELFKDCLAKFREDESKEAEIGAKREATWKRLEEIGNQKQKSS 491          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5G_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana GN=B'GAMMA PE=1 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 9.446e-84
Identity = 149/187 (79.68%), Postives = 163/187 (87.17%), Query Frame = 1
Query:   10 YHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKAASNEPVLI 570
            YHQQLSYCI QFVEKD KLADTVIRGLLKYWPVTNS+KEVMFLGELEEVLE+TQ  EFQRCMVPLF QI RCL+SSHFQVAERALFLWNNDHI NLI QN KVI+PI+FPA+ERN R HWNQAVQSLTLNVRK+ ++ D  LF+ECL KFQEDEA E E+  KREATWK LEE+AA K+ SNE VL+
Sbjct:  319 YHQQLSYCIVQFVEKDFKLADTVIRGLLKYWPVTNSSKEVMFLGELEEVLEATQAAEFQRCMVPLFRQIARCLNSSHFQVAERALFLWNNDHIRNLITQNHKVIMPIVFPAMERNTRGHWNQAVQSLTLNVRKVMAETDQILFDECLAKFQEDEANETEVVAKREATWKLLEELAASKSVSNEAVLV 505          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5Z_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform OS=Arabidopsis thaliana GN=B'ZETA PE=2 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 3.144e-79
Identity = 142/190 (74.74%), Postives = 161/190 (84.74%), Query Frame = 1
Query:    4 AMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMK-AASNEPVLI 570
            ++YHQQLSYCI QFVEKD KLADTVIRGLLKYWPVTNS+KEVMFLGELEEVLE+TQ  EFQRCMVPL  QI RCL+SSHFQVAERALFLWNNDHI NLI QN KVI+PI+FPALERN R HWNQAVQSLT+NVRK+  +ID  LF+ECL KFQ +E  + E+K KRE TW+RLE++A  K   +NE VL+
Sbjct:  338 SVYHQQLSYCIVQFVEKDFKLADTVIRGLLKYWPVTNSSKEVMFLGELEEVLEATQAAEFQRCMVPLSRQIARCLNSSHFQVAERALFLWNNDHIRNLITQNHKVIMPIVFPALERNTRGHWNQAVQSLTINVRKVLCEIDQVLFDECLAKFQVEEVNKTEVKAKRERTWQRLEDLATSKTVVTNEAVLV 527          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5B_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana GN=B'BETA PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.978e-74
Identity = 129/179 (72.07%), Postives = 153/179 (85.47%), Query Frame = 1
Query:    1 VAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAA 537
            + +YHQQLSYCI QFVEKD KLADTVIRGLLKYWPVTN +KE +FLGELEEVLE+TQP EFQRCMVPLF QIGRCL+SSHFQVAERALFLWNN+HI  LI QNR VILPII+P LE+N + HWNQAV  LT N++K+F ++DPELFEEC  +++E +AK +E++ +R+ TWKRL E AA
Sbjct:  306 IVVYHQQLSYCIVQFVEKDYKLADTVIRGLLKYWPVTNCSKENLFLGELEEVLEATQPVEFQRCMVPLFQQIGRCLTSSHFQVAERALFLWNNEHIVGLIAQNRSVILPIIYPTLEKNIQSHWNQAVHGLTTNIKKMFMEMDPELFEECQRQYEEKQAKSKEVEEQRQYTWKRLAEAAA 484          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5D_ARATH (Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform OS=Arabidopsis thaliana GN=B'DELTA PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.195e-74
Identity = 127/179 (70.95%), Postives = 151/179 (84.36%), Query Frame = 1
Query:   10 YHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKA 546
            YHQQLSYC+ QFVEKDCKLADTVIRG+LKYWPVTNS KE+MFL ELEE+LE+TQ  EF+RCMVPL  QI +CLSSSHFQVAERAL+LWNNDH+ NL++QN ++ILPI+FPALE+N   HWNQAV++LT NV K+ SD +P+LFEECL KFQED+ K E+ K K   TW++LEEI A  A
Sbjct:  298 YHQQLSYCVIQFVEKDCKLADTVIRGMLKYWPVTNSAKEIMFLNELEEILEATQLTEFERCMVPLSRQIAQCLSSSHFQVAERALYLWNNDHVTNLVRQNSRIILPIVFPALEKNGSSHWNQAVKNLTENVLKVLSDTNPDLFEECLHKFQEDQQKAEDTKKKNGETWRQLEEIVASMA 476          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5A_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform OS=Arabidopsis thaliana GN=B'ALPHA PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.564e-70
Identity = 125/191 (65.45%), Postives = 157/191 (82.20%), Query Frame = 1
Query:    1 VAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKAASNEPVLIS 573
            +AMYHQQLSYCI QFVEKD KLADTVIRGLLK+WPVTN TKEV+FLGELEEVLE+TQ  EFQRCMVPLF QI RCLSSS+FQVAERALFLWNN+H+  LI QNR VILPIIF +LE+N   HWNQAV  L+ N++++F ++DPELFEEC  +++E +AK ++++ +R+  W+RL+E A  +    +P++ S
Sbjct:  306 IAMYHQQLSYCIVQFVEKDYKLADTVIRGLLKFWPVTNCTKEVLFLGELEEVLEATQTVEFQRCMVPLFQQIARCLSSSNFQVAERALFLWNNEHVVGLIAQNRGVILPIIFASLEKNIESHWNQAVHGLSANIKRMFMEMDPELFEECQQQYEEKQAKSKQVEEQRQNRWRRLDE-AVEEREREDPMITS 495          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5E_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform OS=Arabidopsis thaliana GN=B'EPSILON PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.014e-69
Identity = 123/182 (67.58%), Postives = 154/182 (84.62%), Query Frame = 1
Query:    1 VAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKA 546
            +++YHQQL+YC+TQFVEKD KLADTVIRGLLK+WP+TN  KEV+FLGELEEVL++T+P EFQ+C+VPLF QIG+CL+S+HFQVAERALFLWNN+HI  LI QN+ VI PIIF ALERN + HWNQAV  L+ NVR++F ++D ELFEEC  ++ E+EAK  E+  +RE TWKRLEE A++ A
Sbjct:  315 ISIYHQQLAYCVTQFVEKDYKLADTVIRGLLKFWPLTNCQKEVLFLGELEEVLDATEPSEFQQCVVPLFTQIGKCLNSAHFQVAERALFLWNNEHIVGLIAQNKDVIFPIIFEALERNMKGHWNQAVHGLSENVRRMFLEMDTELFEECEKQYLENEAKACELLEQRELTWKRLEEAASLAA 496          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5I_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform OS=Arabidopsis thaliana GN=B'IOTA PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.264e-61
Identity = 114/197 (57.87%), Postives = 149/197 (75.63%), Query Frame = 1
Query:    1 VAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIAAMKAASNE-PVLISPKTAT 588
            V  Y QQLSYCITQF++K+ KL   VI+GLLK+WP+TNS KEVMFLGE+EE++E+    EFQ+ MVPLF +I  C++SSHFQV+ERALFLWNND I NLI  NR+ ILPI+F ALE+NA+ HWNQ+V +LTLNVRK+F ++D  LF  C  +F+EDEAK+     KR+  W RLE  A+MK  + +  VL++P+  +
Sbjct:  301 VGNYFQQLSYCITQFIDKEPKLGSVVIKGLLKFWPITNSQKEVMFLGEVEEIVEAMSVMEFQKIMVPLFLRIACCVTSSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTALEKNAQNHWNQSVLNLTLNVRKMFCEMDEALFMSCHARFKEDEAKQCSAAEKRKEVWARLENAASMKPITGKTAVLVTPRATS 497          
BLAST of FC923356 vs. ExPASy Swiss-Prot
Match: 2A5G_RABIT (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform OS=Oryctolagus cuniculus GN=PPP2R5C PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.832e-50
Identity = 86/178 (48.31%), Postives = 128/178 (71.91%), Query Frame = 1
Query:    1 VAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSTKEVMFLGELEEVLESTQPGEFQRCMVPLFHQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPALERNARKHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAKEEEIKMKREATWKRLEEIA 534
            +++YH QL+YC+ QF+EKD  L + V+  LLKYWP T+S KEVMFL ELEE+L+  +P EF + M PLF Q+ +C+SS HFQVAERAL+ WNN++I +LI  N   ILPI+FP+L RN++ HWN+ +  L  N  K+F +++ +LF++C  +F+ ++ KE+    +RE  W ++E +A
Sbjct:  260 LSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLA 437          
The following BLAST results are available for this feature:
BLAST of FC923356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
2A5N_ARATH2.033e-8684.53Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5T_ARATH6.541e-8583.06Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5G_ARATH9.446e-8479.68Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5Z_ARATH3.144e-7974.74Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5B_ARATH3.978e-7472.07Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5D_ARATH5.195e-7470.95Serine/threonine protein phosphatase 2A 55 kDa reg... [more]
2A5A_ARATH1.564e-7065.45Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5E_ARATH1.014e-6967.58Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5I_ARATH2.264e-6157.87Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5G_RABIT6.832e-5048.31Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]

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Properties
Property NameValue
Genbank descriptionC31704B08EF StrClemenN Citrus clementina cDNA clone C31704B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923356 ID=FC923356; Name=FC923356; organism=Citrus clementina; type=EST; length=688bp
GTAGCCATGTACCACCAGCAGCTATCTTACTGCATCACACAGTTTGTTGA
GAAAGACTGCAAGCTTGCAGACACTGTTATACGGGGTTTGCTAAAATATT
GGCCAGTTACAAACAGTACTAAAGAGGTCATGTTCTTAGGTGAACTGGAG
GAAGTGTTAGAATCAACACAGCCTGGAGAGTTCCAACGCTGTATGGTACC
TTTGTTTCACCAGATTGGCCGTTGCTTGAGCAGTTCACATTTTCAGGTGG
CTGAGAGAGCATTGTTCTTATGGAACAACGATCACATTGAGAACCTAATC
AAACAGAATCGCAAAGTTATACTACCGATAATCTTCCCTGCTTTGGAGAG
AAATGCCAGAAAGCACTGGAACCAGGCAGTACAGAGCTTGACACTAAATG
TTCGCAAAATCTTCTCTGATATTGACCCAGAGCTCTTTGAGGAGTGCTTA
CTCAAATTCCAAGAAGATGAAGCAAAAGAGGAGGAGATTAAAATGAAACG
TGAAGCCACATGGAAACGCTTGGAAGAAATTGCTGCAATGAAAGCTGCAA
GTAACGAACCTGTGCTCATCTCTCCCAAAACAGCCACACGCCCACGAACA
GGCTAGGGAGGCTGAGGTTCTAATTGGTGAATGCTGGTGGTTTCAATTTT
GCAATTGGCNATGCAACCATAGATGAAAATGATGATTT
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