FC923360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923360 vs. ExPASy Swiss-Prot
Match: GOS11_ARATH (Golgi SNARE 11 protein OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67 Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 1 Query: 205 MDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESGVDWLLRQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQ 672 MDVPSSWDALRKQARK+EAQLDEQMHSYR+LVS+K +K D E+DLE+G+D LLRQLQQVN QMQ WVSSGGSEMVSHTLTRHQEILQDLTQEFYR RSSL+AKQEHASLLEDFREFDRTRLDLEDG GS EQAL+KEH INR+T QMD VISQ Sbjct: 1 MDVPSSWDALRKQARKIEAQLDEQMHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDRTRLDLEDGYGS-EQALIKEHMGINRNTAQMDGVISQ 155
BLAST of FC923360 vs. ExPASy Swiss-Prot
Match: GOS12_ARATH (Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 199 SAMDVPSS-WDALRKQARKLEAQLDEQMHSYRKLVS--SKGSTKVDAAENDLESGVDW---------LLRQLQQVNIQMQDWVSSGG-SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQLKHSRCSGLSRSHLGASIQ 729 S++D+ S W+ LR++ARK+E LD ++ SY KL + ++G VD + SG W LL +L +N M +S + V+ L RH++IL + TQEF R++ ++ + +EHA LL R D G SP +L+E A+I+ S +D VI Q + +R S+ L + +Q Sbjct: 4 SSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGY-VDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHAELLSSVR--DDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRSLFSDVQ 190
BLAST of FC923360 vs. ExPASy Swiss-Prot
Match: GOSR1_HUMAN (Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 54/182 (29.67%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 202 AMDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------VDWLLRQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVIS 669 A S W+ LRKQAR+LE +LD ++ S+ KL +S + D S ++ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS Sbjct: 2 AAGTSSYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETIS 182
BLAST of FC923360 vs. ExPASy Swiss-Prot
Match: GOSR1_BOVIN (Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 56/196 (28.57%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 223 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------VDWLLRQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQLKHSRCSGLSRSHLGASIQA 732 W+ LRKQAR+LE +LD ++ S+ KL +S + D S ++ LL +L +N +M ++ SS G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS ++ + S+ + SIQ+ Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFVAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIQS 203
BLAST of FC923360 vs. ExPASy Swiss-Prot
Match: GOSR1_CRIGR (Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 52/175 (29.71%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 223 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------VDWLLRQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVIS 669 W+ LRKQAR+LE +LD ++ S+ KL +S + D S ++ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETIS 182 The following BLAST results are available for this feature:
BLAST of FC923360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923360 ID=FC923360; Name=FC923360; organism=Citrus clementina; type=EST; length=732bpback to top |