FC923363

Overview
NameFC923363
Unique NameFC923363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923363 vs. ExPASy Swiss-Prot
Match: YGD6_SCHPO (Zinc-type alcohol dehydrogenase-like protein C1773.06c OS=Schizosaccharomyces pombe GN=SPBC1773.06c PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26
Identity = 73/178 (41.01%), Postives = 91/178 (51.12%), Query Frame = 2 
Query:    2 VQDKEHDLDGLVYKDAAIP-KVGENEVLVKIQAASLNYRDLIIPKGAYPFALNFPVVPGSDGAXXXXXXXXXXXXXXXXDQVATLFNQGHQYGAIDPHAAATGLGGAVDGTLREYAVFNEQGLVKSPSNLTAIEASTLSCAALTSWNALYGLK--PLKPXXXXXXXXXXXXSIFGLQF 526
            V D+    D L  ++  +P K+   EVLVK++AASLNYRDLII KG YP  L  PVVPGSDGA                D V   F   +  G     A  + LGG  DG  ++YAV     LV +P NL+  E +TL CAA+T+WN L+G K   +KP            S F LQF
Sbjct:    7 VHDEISGFDQLKPEEYEVPQKLNPGEVLVKLKAASLNYRDLIITKGLYPLPLQLPVVPGSDGAGIIEKVGEDVEGFEKGDSVVCNFFTNYLDGTPTDFATHSALGGTRDGCFQKYAVLPAHALVHAPKNLSFEEIATLPCAAVTAWNGLFGSKEHQVKPGNNVLVLGTGGVSTFALQF 184
The following BLAST results are available for this feature:
BLAST of FC923363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGD6_SCHPO2.945e-2641.01Zinc-type alcohol dehydrogenase-like protein C1773... [more]
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Properties
Property NameValue
Genbank descriptionC31704C03EF StrClemenN Citrus clementina cDNA clone C31704C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923363 ID=FC923363; Name=FC923363; organism=Citrus clementina; type=EST; length=587bp
GGTGCAAGACAAGGAGCATGACCTCGACGGTCTGGTCTATAAGGATGCCG
CCATCCCCAAAGTCGGTGAAAATGAAGTGCTGGTGAAGATCCAAGCCGCC
TCGCTGAATTACCGAGACTTGATTATCCCCAAGGGCGCATACCCCTTCGC
GCTCAACTTCCCGGTCGTCCCAGGCTCGGATGGTGCCGGTGAAGTTGTCG
AAGTCGGATCCAAGGTGGTCGAGTTCAAGAAGGGCGACCAGGTCGCAACT
CTTTTCAACCAGGGCCACCAGTACGGTGCGATTGACCCACATGCCGCAGC
CACTGGTCTGGGCGGCGCCGTCGATGGTACTCTCCGCGAATATGCAGTGT
TCAACGAGCAGGGCCTCGTCAAATCCCCCAGCAACCTGACGGCAATTGAA
GCGAGCACCCTGTCATGCGCTGCATTGACCAGTTGGAATGCCCTGTATGG
ACTGAAGCCCTTGAAGCCGGGTCAGGTCGTCCTCGTGCAGGGAACTGGCG
GTGTCAGCATCTTCGGGTTGCAGTTCGCCAAGGCAGCANGCGCAACAGTG
ATTGCGACCACCTCTTCTGCCGAGAAGGCCGAGAAGC
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