FC923390

Overview
NameFC923390
Unique NameFC923390
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.163e-45
Identity = 94/220 (42.73%), Postives = 124/220 (56.36%), Query Frame = 1
Query:   31 EQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEMFAXLQQKRDMFIAPK 690
            E VKL+G   SP+V RV  AL+LKG++Y+++EENL NKSD+LLKYNPVH+KVPV VH+E+PI ES VI+EYI+E W  +P+LP DPY RA ARFW KF D+ +    +     V                      L DKKFFGG E G+ D+   +IA                +  FP L+ W   F +HP + E LP  D +FA  + + +   A K
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESLSASK 225          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40
Identity = 88/219 (40.18%), Postives = 120/219 (54.79%), Query Frame = 1
Query:   28 MEQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEMFAXLQQKRDMFIA 684
            M +VKL+G W SP+ +RV WAL+LKG+KYEY+EE+  NKS +LL+ NPVH+KVPVL+H+ KPIVES VILEYI+E +    +LPKDPYDRA ARFW KF  + +A     F+                         L DKKFF G++ G AD+    +               + +  FP    W   + +   +KE LP  DE+ A  + +    +A
Sbjct:    1 MAEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFF--RKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVA 217          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.032e-40
Identity = 87/225 (38.67%), Postives = 123/225 (54.67%), Query Frame = 1
Query:   28 MEQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEMFAXLQQKRDMFIAPKMA*K 702
            M +VKL+G W SP+ +RV WAL++KG+KYEY+EE+  NKS +LL+ NPV++KVPVL+H+ KPIVES +ILEYI+E +    +LPKDPYDRA ARFW KF D+ +A     F+                         L DKKFF G++ G AD+    +               + +  FP    W   + +   + E LP  DE+ A  + +    +A + A K
Sbjct:    1 MAEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFF--RKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQAVVASRSAPK 223          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.983e-40
Identity = 88/213 (41.31%), Postives = 121/213 (56.81%), Query Frame = 1
Query:   28 MEQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEMFAXLQQK 666
            M +VKL+G W SP+  RV WAL++KG+KYEY+EE+  NKS +LL+ NP+H+KVPVL+H+ K IVES VILEYI+E +    +LPKDPYDRA ARFW KF D+ + P     ++  G                   + L DKKFF G++ G AD+    +A              + +  FP    W G + +   IKE LP  DE+ A  + +
Sbjct:    1 MAEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNE-LKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSR 211          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 80/207 (38.65%), Postives = 110/207 (53.14%), Query Frame = 1
Query:   25 QMEQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFG-WIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDE 642
            + E+VKL+G W SP+  RV  AL+LKGI YEYVEE L NKS +LL  NP+H+KVPVLVH+ K I+ES VILEYI+E WP++P+LP+DPY+R+ ARF+ K  DE +                               + L  K +FGG  +G  D V G  I               +    FP    W+ +     ++K+ +P  +E
Sbjct:    3 EKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREE 209          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34
Identity = 81/210 (38.57%), Postives = 109/210 (51.90%), Query Frame = 1
Query:   34 QVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWP-----RHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQG-LGD----KKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPD 633
            ++KL+G W SPY  RV   L LK + YEYVEENL +KSD+LL  NPVH+ VPVL+H  +P+ ES VI++YI+E WP     R  ++P DPY+RA ARFW  + D+ + P + A   G                     +G  G+    K FFGG+ +G  D+V G     F           +D    P L AW   FR+    K  +PD
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPD 215          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34
Identity = 80/206 (38.83%), Postives = 116/206 (56.31%), Query Frame = 1
Query:   28 MEQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEM 645
            M +VKL+G   SP+ +RV WAL++KG+KYE++EE+L NKS +LL+ NP+H+K+PVL+H+ K I ES VILEYI+EA+    +LPKDPYDRA ARFW K+ ++  A  + +F+   G                   +   DKK F G++ G AD+V    A                +  FP   AW   + +    +E+ P  DE+
Sbjct:    1 MAEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFF-SKGEEQEKAKEEAYEMLKILDNE-FKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDEL 202          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 70/210 (33.33%), Postives = 107/210 (50.95%), Query Frame = 1
Query:   31 EQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAW-PRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADLVFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEMFAXL 657
            ++V L+  W S Y  R   AL  KG++YEY EENL N+S +LL+ NP+H+K+PVL+H+ KPI ES +I++YI+E W  + PL+P DPY R+ ARFW+ + D+ +  T+   ++  G                   + L DK F+G +  G  DL    I  S                  P+L AW+        +   LPD  +++  +
Sbjct:    3 DEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKG-EEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCL--ITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLI 209          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.462e-29
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 1
Query:   25 QMEQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAW-PRHPLLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADL 489
            +   V L+  WPS +  R+  AL LKGIKYE  EENLS+KS +LL+ NPVH+K+P+L+H+ K I ES  ILEYI+E W  + PLLP DPY+R+ ARFW  + D+ +  T    + G G                   + LG+K +FGG+ +G  D+
Sbjct:    2 ESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGE-LGNKTYFGGDNLGFVDV 156          
BLAST of FC923390 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 76/219 (34.70%), Postives = 107/219 (48.86%), Query Frame = 1
Query:   31 EQVKLIGAWPSPYVYRVIWALQLKGIKYEYVEENLSNKSDMLLKYNPVHQKVPVLVHDEKPIVESTVILEYIEEAWPRHP--LLPKDPYDRAAARFWIKFSDENLAPTFAAFYIGVGXXXXXXXXXXXXXXXXXXXQGLGDKKFFGGNEIGMADL-VFGWIAKSFXXXXXXXXXXXLDANSFPRLHAWIGSFRSHPVIKEHLPDCDEMFAXLQQKRDMF 678
            E+V L+  WPS +  R+  AL  K IKYEY EE+L NKS +LL+ NP+H+K+PVL+H+ KPI ES + +EYIEE W      LLP DPYDRA ARFW  + D+ L       +   G                     LGDK +FGG   G  D+ + G+ +  +            +    P+  AW         + + LPD  ++   ++  R  F
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEG-ALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAEC---PKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
The following BLAST results are available for this feature:
BLAST of FC923390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTX6_SOYBN4.163e-4542.73Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX3_TOBAC3.087e-4040.18Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC4.032e-4038.67Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC8.983e-4041.31Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH6.662e-3538.65Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU6_ORYSJ2.532e-3438.57Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX1_SOLTU9.620e-3438.83Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_SOYBN4.941e-3033.33Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC5.462e-2942.95Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC6.039e-2834.70Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionC31704E06EF StrClemenN Citrus clementina cDNA clone C31704E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923390 ID=FC923390; Name=FC923390; organism=Citrus clementina; type=EST; length=719bp
GGAGTCATGAGAGAAATACAACATCAAATGGAACAAGTTAAGCTAATAGG
AGCTTGGCCAAGTCCCTATGTTTACAGAGTCATATGGGCTCTGCAACTTA
AAGGCATCAAGTACGAATATGTAGAAGAAAACTTGTCGAACAAGAGTGAC
ATGCTTTTGAAGTACAACCCAGTTCATCAAAAAGTCCCTGTGCTTGTTCA
TGATGAGAAACCAATCGTTGAGTCCACCGTTATTCTTGAGTACATAGAGG
AGGCATGGCCTCGGCATCCTTTGCTCCCCAAAGACCCTTATGACAGAGCC
GCGGCGCGATTCTGGATTAAGTTCAGTGATGAAAACCTGGCTCCTACGTT
TGCAGCATTCTATATTGGTGTTGGAGAGGAGCATGAGAAGGCGATAAAAG
AAGCAAAGGAGAAATTGAAAATCATTGAAGAACAAGGCCTTGGAGACAAG
AAATTTTTTGGGGGCAATGAAATTGGGATGGCAGATCTCGTCTTTGGATG
GATTGCTAAATCTTTTGGAGTCGTGGAAGAAGTAGTTGGTGTCAAAGTTC
TTGACGCCAATAGCTTCCCTCGTTTACATGCTTGGATTGGGAGTTTCAGG
AGCCACCCTGTGATTAAAGAGCATCTTCCTGATTGTGATGAGATGTTTGC
TTNACTACAGCAGAAAAGGGACATGTTTATTGCCCCAAAAATGGCTTAAA
AACGCTGTCATCATTGATC
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