FC923402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.150e-103 Identity = 170/230 (73.91%), Postives = 201/230 (87.39%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRKKHMTYSYCYDQI 690 V L+LDERTGSGFVS+D+YLHGFFS+SIKLPADY+AGVV+AFY+SNGD++EKNHDEIDFEFLGNIRG+ WRIQTNIYGNGST +GREERYNLWFDP++DFHQYSILW+ S IIFY+D +PIRE KRTASMGGDFPAKPMSLY+TIWDGS WAT+GGKY VNYKYAPYV++F+D +LHGC+ DP E+ S C + + + ++ SQR KME FR+KHMTYSYCYD + Sbjct: 53 VRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPS-CKDEAVQNLRLASEITESQRNKMEIFRQKHMTYSYCYDHM 281
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 372.474 bits (955), Expect = 1.197e-102 Identity = 172/229 (75.11%), Postives = 194/229 (84.72%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRKKHMTYSYCYDQ 687 V L+LDERTGSGFVS+D YLHGFFSASIKLP+DYTAGVVVAFYMSNGDM+EKNHDEIDFEFLGNIR K WR+QTNIYGNGST GREERYNLWFDP++DFHQYSILW+DS IIF++D +PIRE KRTA MGG FP+KPMSLY TIWDGS WATNGGKY VNYKYAPY+ FSD VLHGC DPIEQ +CD + + ++PSQR KM+ FR++ MTYSYCYD+ Sbjct: 53 VRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPVDPIEQ-FPRCDEGAAEDMRAAQEITPSQRSKMDVFRRRLMTYSYCYDR 280
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 5.967e-86 Identity = 147/234 (62.82%), Postives = 176/234 (75.21%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKC----DITESSKVSIPTGVSPSQRIKMENFRKKHMTYSYCYDQI 690 V L LD TGSGF+S ++Y HGF+S+ IKLPADYTAGVVVAFY SNGD+FEK HDE+D EFLGNI+GK WR QTN+YGNGST GREERY LWFDPS +FH+YSILWT +IIF++D +PIRE R +MG D+PAKPM+LYATIWD SDWAT+GGKY+ NYK+AP+V EF F L GCS DPI++ C D ES S ++ QR M FR++ M YSYCYD + Sbjct: 54 VRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQDYS---SINSHQRAAMRRFRQRFMYYSYCYDTL 284
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 7.812e-78 Identity = 136/242 (56.20%), Postives = 174/242 (71.90%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFD---PIEQTSS--------KCDITESSKVSIP-TGVSPSQRIKMENFRKKHMTYSYCYDQI 690 V L LD+ TGSGF+S +Y HGFFS+ IKLP YTAG+VVAFY SNGD+F K+HDE+D EFLGN+ GK WR QTN+YGNGST+ GREERY LWFDPS +FH+YSILWT ++IIF++D +PIRE R M GD+P KPMSLYATIWD S WAT+GGK+ V+Y ++P+V+EF D L GC+ P E ++ C +++ +S + +SP Q M FR+++M YSYCYD I Sbjct: 62 VRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENNNNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTI 303
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 2.982e-61 Identity = 112/235 (47.66%), Postives = 152/235 (64.68%), Query Frame = 1 Query: 7 LSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQT-SSKCDITESSKVSIP-------TGVSPSQRIKMENFRKKHMTYSYCYDQ 687 L+LD+ +G+G VS + Y +GFFSA +KLPA + +GVVVAFY+SN + + K+HDEID E LG R +W IQTN+Y NGST GREE++ WFDP+ FH Y+++W +F +D IP+R+F + +P+KPMSLY T+WDGS+WAT GGKY VNYKYAP+V +D L GCS + T S C + S S+ +S +Q M+ R+K M YSYC D+ Sbjct: 65 LTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFATLSKNQINAMDWARRKLMFYSYCSDK 299
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.904e-53 Identity = 105/231 (45.45%), Postives = 144/231 (62.34%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYM-SNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITES-SKVSIPTGVSPSQRIKMENFRKKHMTYSYCYDQ 687 V LS+D +GSGF S Y GFF IKLP +AGVV AFY+ S GD HDE+DFEFLGN +GK IQTN++ NG GRE+++ WFDP+ FH Y ILW QI+FY+D +PIR FK G ++P+KPM L A++W+G +WAT+GGK ++N+ YAP+ ++ F HGC + ++ C T + +S +++ MEN R K+MTY YC D+ Sbjct: 54 VQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGD----THDEVDFEFLGNRQGKPIAIQTNVFSNGQG--GREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDR 278
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.175e-49 Identity = 102/234 (43.59%), Postives = 144/234 (61.54%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTG----VSPSQRIKMENFRKKHMTYSYCYDQI 690 V LSLD +GSGF S + Y GFF IK+P T+GVV AFY+++ HDE+DFEFLGN GK +QTN++ NG + RE++ LWFDPS DFH Y+ILW QI+ Y+D IP+R FK T S G ++P+KPM + ++W+G +WAT+GGK ++N+ AP+ F F GC T+++ + SS TG +S S++ N R+K+M Y YC D++ Sbjct: 61 VQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKG---NTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGN--REQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCF------TNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKV 282
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.619e-49 Identity = 99/233 (42.49%), Postives = 141/233 (60.52%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTG----VSPSQRIKMENFRKKHMTYSYCYDQ 687 V L +D+ +G GF S D Y G F IK+P+ T G+V AFY+++ HDEIDFEFLGN GK +QTN++ NG + REER+ LWF+P+ +H Y +LW QI+FY+D IPIR +K G +P+KPM + A++W+G DWAT+GG+ +VN+ Y+P++ F DF L GC+ D C ESS G +S +++ E+ R K+M Y YC D+ Sbjct: 57 VDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKG---GGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGN--REERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKN--ENGVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGAC---ESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDR 279
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49 Identity = 97/231 (41.99%), Postives = 140/231 (60.61%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGS---TSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRKKHMTYSYCYD 684 V L LD+ TGSGF S Y G+F ASIKL +TAGV + Y+SN +HDE+D EFLG GK + +QTN++ GS IGRE ++ LWFDP+ DFH Y+ILW +QI+F++D +PIR + R FP +PM +Y +IWD SDWAT G+ + +Y+Y P+V ++ +F L GC+ D +SS C + + G+S Q + ++ + Y+YC+D Sbjct: 59 VTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNE--AIFPTRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTAD----SSSSCRPPSPAPMR-NRGLSRQQMAALTWAQRNFLVYNYCHD 282
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.877e-47 Identity = 98/228 (42.98%), Postives = 138/228 (60.53%), Query Frame = 1 Query: 13 LDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTS---IGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREF-KRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRKKHMTYSYCYD 684 LD +GSGF S + G+F A+IKL YTAGV+ + Y+SN + HDE+D EFLG GK + +QTN+Y GS IGRE ++ LWFDP+ DFH Y+ILW+ +IIF +D IPIR + K++AS FP +PM LY +IWD S WAT GKY+ +YKY P+ ++++F GC+ +S++C +S G++ Q M + M Y+YC D Sbjct: 67 LDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSAS---TFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCT----AYSSARCYPLSASPYR-SGGLTRQQHQAMRWVQTHSMVYNYCKD 286 The following BLAST results are available for this feature:
BLAST of FC923402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923402 ID=FC923402; Name=FC923402; organism=Citrus clementina; type=EST; length=691bpback to top |