FC923403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 7.362e-40 Identity = 76/166 (45.78%), Postives = 114/166 (68.67%), Query Frame = 1 Query: 142 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNS 639 M P +SD+GK+A+DLL +DY HKFT++ S+TG+ ++A+GLKK E+F+ D+++ K+ N T DVKVDT S+V T +T+ + P K SF +PD KSGK++LQYLH +A I++SIGL +PL+ S G+ + LG ++ FDTA+ +F K AG+ +S Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSS 166 HSP 2 Score: 25.0238 bits (53), Expect = 7.362e-40 Identity = 11/21 (52.38%), Postives = 12/21 (57.14%), Query Frame = 3 Query: 642 DFSAALLLADKGQATQASYIH 704 D A+L L DKG ASY H Sbjct: 168 DLIASLALNDKGDTVSASYYH 188
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37 Identity = 69/166 (41.57%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 142 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNS 639 MG P ++++GK+A+DLL KDY HKF+++ S TG+ ++++G KK ++F+ D+N+ K+ N T D+KVDT S++ T +T+ + P K LSFR+PD +SGKL++QYLH +A I +S+GL P++ S +G+ + LG +V FDT + F K AG+ + Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTN 166
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.057e-36 Identity = 70/162 (43.21%), Postives = 106/162 (65.43%), Query Frame = 1 Query: 142 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGI 627 M P ++D+GK+A+DLL KDY KFT+S S TG+ ++++G KK E+F+GD+N+ K+ N T D+KVDT S++ T +T+ + P KA LSF++P+ SGK++LQYLH +A I SS+GL P++ S+ IG+ L G ++ FDT K A + Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAV 162 HSP 2 Score: 21.1718 bits (43), Expect = 2.057e-36 Identity = 9/21 (42.86%), Postives = 11/21 (52.38%), Query Frame = 3 Query: 642 DFSAALLLADKGQATQASYIH 704 D +L L +KG ASY H Sbjct: 168 DLIGSLTLNEKGDLLSASYYH 188
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 5.924e-36 Identity = 69/162 (42.59%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 154 PAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNS 639 P + ++GK+A+DLL +DY HKFTL+ +S G+ ++AT KK ++ G+I S K+ N TVDVK ++ S+V T VT+ ++ P K+ LSF +PD +SGK +LQY H +A + +SIGL +P++ LS+ G+K L +G +V DTA+ + KY AG+ ++ Sbjct: 4 PGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSN 165 HSP 2 Score: 21.9422 bits (45), Expect = 5.924e-36 Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 3 Query: 642 DFSAALLLADKGQATQASYIH 704 D A+L L +KG + ASY H Sbjct: 167 DLIASLNLNNKGDSLTASYYH 187
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.222e-35 Identity = 73/164 (44.51%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 154 PAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDIL-PSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNSQ 642 P +S +GK+AKDLL +DY HKFTL+ ++ G ++AT KK ++ +G+I S K+ N TVDVK ++ S+V T +T D+ P K LSF +PD KSGK++LQYLH +A I++SIGL P++ LS G+ L +G +V DTA+ +F KY A + +Q Sbjct: 4 PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQ 167 HSP 2 Score: 21.9422 bits (45), Expect = 2.222e-35 Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 3 Query: 642 DFSAALLLADKGQATQASYIH 704 D A+L L +KG + ASY H Sbjct: 168 DLIASLNLNNKGDSLTASYYH 188
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 7.441e-33 Identity = 63/161 (39.13%), Postives = 101/161 (62.73%), Query Frame = 1 Query: 142 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAG 624 M P ++++GK+A+DLL +DY KF+++ SSTG+ ++ TG K +F+GD+ + K+ N T DVKV T SS+ T +T + P K + ++PDHKSGK ++QY H +A I +S+G TP++ S +G+ L LG +V ++T S +F + AG Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAG 161 HSP 2 Score: 24.6386 bits (52), Expect = 7.441e-33 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 642 DFSAALLLADKGQATQASY 698 D +A+L+L DKG+ ASY Sbjct: 168 DLTASLILNDKGEKLNASY 186
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.140e-32 Identity = 64/160 (40.00%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 163 FSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDI-LPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNS 639 ++D+GK+ +DLL KDY+ KF L+ S G+ ++A G +K+E G++++ K+ TVDVK ++ S + T +T+ + P K+ ++ +PD +SGKL+ QYLH +A +++S+GLN P++ LS GSK L +G +V FDTA++ F KY A + L S Sbjct: 8 YTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTS 167 HSP 2 Score: 22.7126 bits (47), Expect = 2.140e-32 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 630 LEQPDFSAALLLADKGQATQASYIH 704 L PD A+L L + G ASY H Sbjct: 165 LTSPDLIASLHLNNHGDTLVASYYH 189
BLAST of FC923403 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 8.634e-31 Identity = 62/167 (37.13%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 142 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSSVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNSQ 642 M P ++++GK+A+DLL KD++ KF+++ S G+ +++TG KK ++ +GD+ + N T D+KV T S+ T+ + P ++ SF++PD SGK++LQYLH +A I +S+GL P + S IGS L +G +V FDT S +F K AG+ + Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKE 167 HSP 2 Score: 23.0978 bits (48), Expect = 8.634e-31 Identity = 10/21 (47.62%), Postives = 12/21 (57.14%), Query Frame = 3 Query: 642 DFSAALLLADKGQATQASYIH 704 D A+L + DKG ASY H Sbjct: 168 DLIASLTVNDKGDLLNASYYH 188 The following BLAST results are available for this feature:
BLAST of FC923403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923403 ID=FC923403; Name=FC923403; organism=Citrus clementina; type=EST; length=706bpback to top |