FC923405

Overview
NameFC923405
Unique NameFC923405
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length550
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2680 contig Ccv1_Contig2680:1..550. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923405 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.060e-40
Identity = 77/184 (41.85%), Postives = 118/184 (64.13%), Query Frame = 3
Query:    3 RNRHRFHDWVAEQLSGTPSSTIQVNSFLNLSNGVATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTM---VENSYFIEAFNDATDICWKRFMSPVAAFWK 545
            +N HR   W+++ +  +PS+T Q++  L     + T +P+ V+H+L   F NY KG+ F+  L + LG GIFN +GP W  QR++ASHEF+TKS++NF+  +V++E+T RL+P L  +     ++D Q +L+ FTF+N+CN+AFG DP  +      S F EA+ DAT+I  KRF  P+   WK
Sbjct:   62 KNLHRRIQWLSDIVQISPSATFQLDGTLG-KRQIITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSSTQTNNILDFQDILQRFTFDNICNIAFGYDPEYLTPSTNRSKFAEAYEDATEISSKRFRLPLPIIWK 244          
BLAST of FC923405 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.063e-32
Identity = 72/183 (39.34%), Postives = 112/183 (61.20%), Query Frame = 3
Query:    6 NRHRFHDWVAEQLSGTPSSTIQVNSFLNLSNGVATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTMVEN---SYFIEAFNDATDICWKRFMSPVAAFWK 545
            N HR   W ++ L   PSST  ++     +  V TA PA V+H+L TNF  Y KG  F   + + LGDGIFNADG +W  QR+I+SHEF+T+SL+ F+  VV+ E+++RL+P L  A +    +D Q +L+  TF+N+C +AFG DP  ++ +     F +AF++++ +  +R  + +   WK
Sbjct:   58 NFHRRIQWTSDILQTIPSSTFVLHRPFG-ARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNSQTTLDFQDILQRLTFDNICMIAFGYDPEYLLPSLPEIPFAKAFDESSQLSIERLNALIPLLWK 239          
BLAST of FC923405 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.344e-27
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 3
Query:    6 NRHRFHDWVAEQL---SGTPSSTIQVNSFLNLSNG--VATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTM---VENSYFIEAFNDATDICWKRFM 521
            NR R HDW+A+ L    GT  +   V  F+  + G    T  P NV H+L T F NY KG  + A   +LLG GIFN+DG TW +QRK A+ EF+T++L+  +   V   I  RL   L  A      +DLQ +    TF+N+C + FG DP T+   + ++ F  AF+ AT+   KR +
Sbjct:   48 NRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNGTIKNRLWLILDRAVQNNKPVDLQDLFLRLTFDNICGLTFGKDPETLSLDLPDNPFSVAFDTATEATLKRLL 227          
BLAST of FC923405 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 73/182 (40.11%), Postives = 99/182 (54.40%), Query Frame = 3
Query:    9 RHRFHDWVAEQL---SGTPSSTIQVNSFLNLSNGVATA--DPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPST----MVENSYFIEAFNDATDICWKRFMSP 527
            R R HDW+ E L    GT  + I    FL    G+ T   DP N+ H+L T F NY KG  + AV  + LG GIFN+DG TW  QRK A+ EF+T++L+  +   V   I  R  P L  A +    +DLQ ++   TF+N+C +AFG D  T    + EN  F  AF+ AT+   +RF+ P
Sbjct:   46 RDRMHDWITENLRACGGTYQTCICAVPFLAKKQGLVTVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPVDLQDLILRLTFDNICGLAFGKDTRTCAPGLPENG-FASAFDRATEASLQRFILP 226          
BLAST of FC923405 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.188e-21
Identity = 63/187 (33.69%), Postives = 101/187 (54.01%), Query Frame = 3
Query:    6 NRHRFHDWVAEQLSGTPSSTIQVNSFLNLSNGVATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTMVEN-------SYFIEAFNDATDICWKRFMSPVAAFWK 545
            N  R HD+  +Q     +  +   +     + V T DP NV H+L TNF NY KG+    ++++LLGDGIFN DG  W  QRK+AS EF++K LK+F + V  +    +L   L  A    L +++Q +    + +++C V FG+D +++  +       + F +AF+ A  + + R M  V +FWK
Sbjct:   49 NFERLHDYHTDQAQRYKTFRVVYPT----CSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFSSGVFCNN-AAKLANILAQAAKLNLSVEMQDLFMRSSLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAMVFHRHM--VGSFWK 228          
The following BLAST results are available for this feature:
BLAST of FC923405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C94A1_VICSA1.060e-4041.85Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C94A2_VICSA1.063e-3239.34Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A1_ARATH1.344e-2738.89Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH2.994e-2740.11Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C04C1_PINTA4.188e-2133.69Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
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Properties
Property NameValue
Genbank descriptionC31704F09EF StrClemenN Citrus clementina cDNA clone C31704F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923405 ID=FC923405; Name=FC923405; organism=Citrus clementina; type=EST; length=550bp
TCCGCAACCGCCACCGCTTCCACGACTGGGTCGCCGAGCAGCTCTCCGGA
ACCCCATCTTCCACTATTCAAGTCAACTCCTTCCTCAACCTCTCCAATGG
CGTGGCCACCGCCGACCCCGCCAATGTCCGCCACTTGCTCCACACCAACT
TCCCCAACTACGTCAAAGGCTCCCGCTTCTCCGCCGTCCTCCGCGAGCTC
CTCGGCGACGGCATCTTCAACGCCGACGGACCCACCTGGACTCTCCAGCG
CAAGATCGCCAGCCACGAGTTCAGCACCAAGTCCCTCAAGAACTTCATAA
CGGACGTGGTCGAATCTGAGATCACCGAACGGCTCTTGCCGTCCCTGTGC
ATCGCCTGCGACGAGGGCTTGGTGATTGATTTGCAAAAAGTGTTGGAAGA
TTTCACTTTTAATAATATGTGCAACGTTGCATTCGGTGTTGATCCTTCTA
CTATGGTGGAAAATTCTTATTTTATTGAAGCATTTAACGACGCCACCGAT
ATTTGCTGGAAAAGATTCATGTCCCCAGTTGCTGCGTTTTGGAAAGCGAA
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