FC923409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_CRYNE (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans GN=ATP23 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.132e-32 Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 164 QRSLRN--PTVKFLRQHLEKAGCGFGDKFIKAVHCNKKIAGGYVRGEGILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYC-SAGAAKDAMEAVCDVCYHDTQPFD 646 +R L N P + FL HL+ AGC F ++ C + AGG+ GIL+C + + + + HEL+HA+D CR +DW N HHACSEIRA +LSGDC + RE+ RG+ Q CV+RR + SV+ANP C S A+ A+ V + C+ DT+PFD Sbjct: 62 KRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQDRFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTREVKRGFYAFNKQHQACVKRRAILSVLANPACTSPEMAEKAVNEVWESCFTDTRPFD 224
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica GN=ATP23 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 66/159 (41.51%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 179 NPTVKFLRQHLEKAGCGFGDKFIKAVHCNKKIAGGYVRGEGILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMK--IRGHEQDCVRRRVMKSVIANPYCSAGA-AKDAMEAVCDVCYHDTQPFD 646 +PTV+F++ +EK G + HC+ AGG+ GILVC NH+ + + + HE++H YD + +DW N HHACSEIRA LSG+C EL++G + RGH Q+C +RR + SV+ANP C A A + V D C++DT+PFD Sbjct: 90 SPTVRFMKDQIEKIGGDISSNNVFCDHCDDFKAGGFHPKYGILVCQNHVKSRSHLEDTLAHEMVHYYDNTK-FKVDWMNLKHHACSEIRASTLSGECRMMNELMKGKLARLTRGH-QECAKRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29 Identity = 68/174 (39.08%), Postives = 108/174 (62.07%), Query Frame = 2 Query: 146 ECQDMIQRSL-RNPTVKFLRQHLEKAGCG-FGDKFIKAVHCNKKIAGGYVRGEG-ILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAGAAKDAMEAVCDVCYHDTQPFDRAP 655 +CQ M++ +L +P K L ++++GC + D+ C+ ++GG+ I++C N+++ Q +N+V+ HELIHA+D CR A++DW +N H ACSEIRA +LSGDC EL R ++GH Q CVR R ++S++A S A+ A++ V D C++D +PF R P Sbjct: 40 KCQLMLKIALDTSPYAKLLLDAMKQSGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQNNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLANELTRFKFGVKGHHQVCVRDRALRSILAVRNISRETAEKAVDEVFDSCFNDHEPFGRIP 212
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_HUMAN (Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens GN=XRCC6BP1 PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.095e-28 Identity = 67/175 (38.29%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 143 EECQDMIQRSLR-NPTVKFLRQHLEKAGCGFG-DKFIKAVHCNKKIAGGYVRGEG-ILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAGAAKDAMEAVCDVCYHDTQPFDRAP 655 ++CQ + ++L NP VK L ++ +GC D+ CN ++GG+ I++C N+++ Q +N+V+ HELIHA+D CR A++DW +N H ACSE+RA +LSGDC E+ R + ++ H Q CVR R S++A S AK A++ V + C++D +PF R P Sbjct: 50 QKCQLRLLKTLETNPYVKLLLDAMKHSGCAVNKDRHFSCEDCNGNVSGGFDASTSQIVLCQNNIHNQAHMNRVVTHELIHAFDHCR-AHVDWFTNIRHLACSEVRAANLSGDCSLVNEIFRLHFGLKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEPFGRIP 223
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_DANRE (Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=zgc:162885 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 80/228 (35.09%), Postives = 120/228 (52.63%), Query Frame = 2 Query: 53 GRRVREMSEEPAPKSIPESSSSA-----------VNGGR----TIEE--------CQDMIQRSL-RNPTVKFLRQHLEKAGCG-FGDKFIKAVHCNKKIAGGYVRGEG-ILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAGAAKDAMEAVCDVCYHDTQPFDRAP 655 G + ++S EP + P SS G R T+EE CQ M+Q ++ +P K L ++ +GC F D+ C+ ++GG+ I++C N+++ Q +N+V+ HELIHA+D CR A +DW SN H ACSEIRA +LSGDC + E R +R H Q+CVR R ++S++A S A+ ++ V D C++D PF R P Sbjct: 5 GAKAADLSREPPGEQKPSPSSRQNEEDLGYNLYPERGSRLKKSTVEESLFTFKHKCQLMLQFAMDTSPYAKLLLGAMKSSGCTVFKDRHFSCEDCDGTVSGGFDAATSQIVLCQNNIHQQAHMNRVVTHELIHAFDHCR-AQVDWFSNYRHLACSEIRAANLSGDCSFINEFSRFNFGLRKHHQECVRGRALRSILAVRRVSREEAERVVDEVFDSCFNDHAPFGRIP 231
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_XENTR (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus tropicalis GN=TEgg079g08.1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 66/174 (37.93%), Postives = 105/174 (60.34%), Query Frame = 2 Query: 146 ECQDMIQRSL-RNPTVKFLRQHLEKAGCG-FGDKFIKAVHCNKKIAGGYVRGEG-ILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAGAAKDAMEAVCDVCYHDTQPFDRAP 655 +CQ M++ +L +P K L ++ GC + D+ C+ ++GG+ I++C N+++ Q +N+V+ HELIHA+D CR A++DW +N H ACSEIRA +LSGDC EL R ++ H + CVR R ++S++A S A+ A++ V D C++D +PF R P Sbjct: 40 KCQVMLKIALDTSPYAKLLLDAMKHTGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQNNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLANELTRFKFGVKEHHKVCVRDRALRSILAVRNVSRETAEKAVDEVFDSCFNDHEPFGRIP 212
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_SCHPO (Mitochondrial inner membrane protease atp23 OS=Schizosaccharomyces pombe GN=atp23 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 63/169 (37.28%), Postives = 101/169 (59.76%), Query Frame = 2 Query: 155 DMIQRSL--RNPTVKFLRQHLEKAGCGFGDKFIKAVHCNKKIAGGYVRGEGILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMK-IRGHEQDCVRRRVMKSVIANPYC-SAGAAKDAMEAVCDVCYHDTQPFDR 649 + ++R+L ++P + FL+ L++ C K I C+ + GGY+ G+GI++C N + + I HE+IH +D+ R +DW+N H ACSEIRA +SG+C + +EL G +K R H Q+CV+RR SV NP C S A+ +E V + C++D +PF++ Sbjct: 16 ERVKRALMSQSPVIIFLKTALDRLNCNIEAKDISCQPCDAQSTGGYIPGKGIVLCENRLYTKKMAENTIAHEMIHMFDDHR-FEVDWNNLRHQACSEIRASSMSGECRWTKELRFGNIKTFRKHHQECVKRRATISVQGNPNCKSKEQAEAIVEEVFNSCFNDFRPFEK 183
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_MALGO (Mitochondrial inner membrane protease ATP23 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=ATP23 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 77/217 (35.48%), Postives = 112/217 (51.61%), Query Frame = 2 Query: 62 VREMSEEPAPKSIP-ESSSSAVNGGRTIEECQDMIQRSLRNPTVKFLRQHLEKAGC------------GFGDKFIKAVHCNKKIAGGY--------VRGEGILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYC-SAGAAKDAMEAVCDVCYHDTQPFD 646 +R + + +P S E+ + GR + +D+++ S P V+F+ +HL C G K + A C IAGG+ GIL+C+N + + + I HE+IH +D CR +DW N HHACSEIRA LSGDC++ RE+ R + + Q+CV+RR + SV NP C S A +E V D C+HDT+PFD Sbjct: 28 IRSLVDVSSPLSPDTETREDVIARGRCEQWKEDLLRTS---PMVRFMVKHLTLIQCNPLSPREDSASQGTPPKLLIA-SCPPDIAGGFSPSPPERPTAESGILLCANRIFSKAHLEDTISHEMIHWWDHCRF-KVDWGNLRHHACSEIRAASLSGDCNWTREINRRHFALSKQHQNCVKRRGILSVRGNPACKSEEMAMKVVEDVWDSCFHDTRPFD 239
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_COCIM (Mitochondrial inner membrane protease ATP23 OS=Coccidioides immitis GN=ATP23 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 66/172 (38.37%), Postives = 94/172 (54.65%), Query Frame = 2 Query: 143 EECQDMIQRSLR-NPTVKFLRQHLEKAGCGFGDKFIKAVHCNKKIAGGYVRGEGILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDW-SNCAHHACSEIRAGHLSGDCHYKRELL-RGYMKIRGHEQDCVRRRVMKSVIANPYC-SAGAAKDAMEAVCDVCYHDTQPFD 646 + C+D L+ +P ++FL+ ++++ G I C + AGG+ GI +C+N M Q + + HE+IHAYD R +DW N H AC+EIRA +LSG+C + RE RG K H Q+CVRRR + SV A P C A + V D C+ DT+PFD Sbjct: 63 KRCEDQRDYLLQYSPLIRFLQDNIQQLGGNISKHNIFCRRCKNRQAGGFDPDYGIQICANEMRNQGHLEDTLAHEMIHAYDHMR-FKVDWDDNLRHAACAEIRASNLSGECRWMREFFSRGQWKFAQHHQECVRRRAILSVQARPACKDEQHATQVVNEVWDSCFRDTRPFD 233
BLAST of FC923409 vs. ExPASy Swiss-Prot
Match: ATP23_EMENI (Mitochondrial inner membrane protease atp23 OS=Emericella nidulans GN=atp23 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 2 Query: 125 NGGRTIEECQDMIQRSLR-NPTVKFLRQHLEKAGCGFGDKFIKAVHCNKKIAGGYVRGEGILVCSNHMNIQDDVNQVIIHELIHAYDECRAANLDW-SNCAHHACSEIRAGHLSGDCHYKRELL-RGYMKIRGHEQDCVRRRVMKSVIANPYC-SAGAAKDAMEAVCDVCYHDTQPFD 646 N + C+D L+ +P ++++ + + G I C + AGG+ GIL+C+N M Q + + HE++HAYD R +DW +N H AC+EIRA LSG+C + RE RG K+ Q+CVRRR + SV+A P C G A+ + V D C+ DT+PFD Sbjct: 59 NEAADCKRCEDQRDYLLQWSPIIRYMSDSIRQLGGDLSSHNIYCRRCTNRKAGGFDPEYGILICANEMKDQGHLEDTMAHEMVHAYDHLR-FKVDWTNNLRHAACTEIRASSLSGECRWAREFFRRGQWKLTQQHQECVRRRAVLSVMARPGCQDKGHAEKVVNEVWDSCFRDTRPFD 235 The following BLAST results are available for this feature:
BLAST of FC923409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923409 ID=FC923409; Name=FC923409; organism=Citrus clementina; type=EST; length=676bpback to top |