FC923424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.727e-19 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 3 Query: 108 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 E R FVGGL+W + L+ F +FG +I+ +I+ +R SGR RGFGF+T+ D +AM DAI EM+G+E RVI+VN+AQ + G Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSG 88
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18 Identity = 41/84 (48.81%), Postives = 61/84 (72.62%), Query Frame = 3 Query: 108 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 E R FVGGL+W + +LE F +FG++I+ +I+ +R +GR RGFGF+T+ D ++M DAI EM+G+E R I+VN+AQ + GG Sbjct: 5 EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSRGGG 88
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.828e-18 Identity = 43/90 (47.78%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 93 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 MA D E R FVGGL+W ER LE AF +FG++++ +I+ +R +GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ + G Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRGSG 90
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.835e-17 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 93 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 MA D E R FVGGL+W + LENAF +G+I++ +++ +R +GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ + GG Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSRGGG 90
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.835e-17 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 96 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 +G E R FVGGL+W +R LE AF ++G +I+ +I+ +R +GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ + G Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSRGSG 90
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.129e-17 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 93 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 MA D E R FVGGL+W LE AF FG++I+ +++ +R +GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ + GG Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSRGGG 90
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.129e-17 Identity = 41/90 (45.56%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 93 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 MA D E R FVGGL+W +R LE AF ++G++++ +I+ +R +GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ + G Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRGSG 90
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.189e-16 Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 108 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 359 E R FVGGL+W + LE AF +FG I + +I+ +R +GR RGFGF+T+ D ++M DAI M+G+E R I+VN+AQ + G Sbjct: 5 EYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSRGSG 88
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.007e-15 Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = 3 Query: 108 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 350 E R FVGGL W ++ L+NAF ++G +I+ +I+ +R +GR RGFGF+T+A AM AI M+G++ R I+VN+AQ + Sbjct: 5 EYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
BLAST of FC923424 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 31/80 (38.75%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 111 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERGSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 350 NR++VG LSW V + LE+ F GK++E +++ +R SGR +GFGF+TY + + +AI+ + G + R I V++A+ + Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283 The following BLAST results are available for this feature:
BLAST of FC923424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923424 ID=FC923424; Name=FC923424; organism=Citrus clementina; type=EST; length=366bpback to top |