FC923429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 3.302e-77 Identity = 136/169 (80.47%), Postives = 149/169 (88.17%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 MAST CFLHHHAL T AR+SSS R + K P +VCRAQKQ QE++G VSRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNPSKEREFPGQVLRYEDNFD NSN+SVII PTDKKSI D+GSPEEFLSKVDYLLGK+ Sbjct: 1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQ 168 HSP 2 Score: 42.743 bits (99), Expect = 3.302e-77 Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY GKT+SEGGFDPDAVA Sbjct: 164 LLGKQAYFGKTASEGGFDPDAVA 186
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2) HSP 1 Score: 268.855 bits (686), Expect = 7.999e-76 Identity = 135/173 (78.03%), Postives = 155/173 (89.60%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 MASTQCFLH HALS++ ART+SS QR+VS++KP Q+VCRAQKQ+ QEDDG++V SRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNPSKE EFPGQVLRYEDNFD SN+ V +TPTDKKSITDYGSPEEFL++VD+LLGK+ Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLLGKQ 173 HSP 2 Score: 35.039 bits (79), Expect = 7.999e-76 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY GKT SEGGF+ AVA Sbjct: 169 LLGKQAYFGKTDSEGGFESGAVA 191
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2) HSP 1 Score: 258.84 bits (660), Expect = 4.694e-73 Identity = 127/170 (74.71%), Postives = 150/170 (88.24%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 MA + CFLH AL+++ AR+SSS QRHVS KP QI+C+AQ+ EDD SAVSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNPSKE E+PGQVLR+EDNFD SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGK+ Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQ 168 HSP 2 Score: 35.8094 bits (81), Expect = 4.694e-73 Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY G+T+SEGGFD +AVA Sbjct: 164 LLGKQAYFGETASEGGFDNNAVA 186
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 1.358e-72 Identity = 129/167 (77.25%), Postives = 144/167 (86.23%), Query Frame = 1 Query: 49 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 ASTQCFLH +HAL ++PARTSS V + KP Q++CRAQKQ + +AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNPSKE EFPGQVLRYEDNFD SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGK+ Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQ 165 HSP 2 Score: 35.039 bits (79), Expect = 1.358e-72 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY GKT SEGGF+ AVA Sbjct: 161 LLGKQAYFGKTDSEGGFESGAVA 183
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 3.928e-72 Identity = 129/172 (75.00%), Postives = 150/172 (87.21%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 MAST CFLHHHA ++PA R S++QR+ + +IKP QIVC+AQKQ E + S VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNPSKE+EFPGQVLRYEDNFD SN+SV++ PTDKKSITD+GSPE+FLS+VDYLLGK+ Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQ 172 HSP 2 Score: 35.039 bits (79), Expect = 3.928e-72 Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY GKT SEGGFD VA Sbjct: 168 LLGKQAYFGKTDSEGGFDSGVVA 190
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 6.683e-72 Identity = 131/167 (78.44%), Postives = 141/167 (84.43%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 MASTQCFLHH TTP RT S QR V KP IVC+AQKQ D + VSRRLAL+VLIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNPSKEREFPGQVLRYEDNFD SNVSV++ TDKKSITDYGSPEEFLSKVDYLLGK+ Sbjct: 1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSVLIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQ 164 HSP 2 Score: 34.2686 bits (77), Expect = 6.683e-72 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+A+ G+T SEGGFD +AVA Sbjct: 160 LLGKQAFFGQTDSEGGFDTNAVA 182
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 8.716e-72 Identity = 131/169 (77.51%), Postives = 146/169 (86.39%), Query Frame = 1 Query: 49 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 ASTQCFLH +HAL ++PARTSS VS+ KP Q++CRAQKQ DD S AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNPSKE E+PGQVLRYEDNFD SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGK+ Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQ 163 HSP 2 Score: 35.039 bits (79), Expect = 8.716e-72 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY GKT SEGGF+ AVA Sbjct: 159 LLGKQAYFGKTDSEGGFESGAVA 181
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 8.117e-67 Identity = 130/176 (73.86%), Postives = 148/176 (84.09%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKKPIPAK 561 MASTQCFLHHHALST PART + V ++KP Q+ VCRAQKQ+ ++D +VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE E+PGQVLR+EDNFD SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG++ K Sbjct: 1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGK 175
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 3.255e-65 Identity = 117/170 (68.82%), Postives = 144/170 (84.71%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKK 546 MA + CFLH AL+++ AR+S SSQR+VS K +VC+AQ+ E+D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y+GDGF++ +P+KWNPS+E E+PGQVLRYEDNFD SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGK+ Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQ 165 HSP 2 Score: 35.8094 bits (81), Expect = 3.255e-65 Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 531 LAGKKAYSGKTSSEGGFDPDAVA 599 L GK+AY G+T+SEGGFD +AVA Sbjct: 161 LLGKQAYFGETASEGGFDNNAVA 183
BLAST of FC923429 vs. ExPASy Swiss-Prot
Match: PSBP3_TOBAC (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.211e-64 Identity = 129/177 (72.88%), Postives = 147/177 (83.05%), Query Frame = 1 Query: 46 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQ-KQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKKPIPAK 561 MASTQCFLHHHALST PARTS + V ++K Q+ VCRAQ KQ+ + D +VSRRLALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE E+PGQVLR+EDNFD SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG++ K Sbjct: 1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGK 176 The following BLAST results are available for this feature:
BLAST of FC923429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923429 ID=FC923429; Name=FC923429; organism=Citrus clementina; type=EST; length=601bpback to top |