FC923433

Overview
NameFC923433
Unique NameFC923433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14465 contig Ccv1_Contig14465:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 9.446e-84
Identity = 150/211 (71.09%), Postives = 170/211 (80.57%), Query Frame = 1
Query:   55 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            MG+YLSTPKT+KFSEDG+N  +RYGLSSMQGWRA+MEDAHAA  DLD +TSF GVYDGHGGK V+KFCAKYLHQQVL  E Y+AGD+ TS QKAF RMDEMM+GQRGWRELA+LGDK++KFSGMIEG IWSP+ G++ +  D WA EE                GPHSDF GP SGSTACVA++RDKQL VANAGDSRCV+SRK QA NLS
Sbjct:    1 MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLDDNTSFLGVYDGHGGKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEE----------------GPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLS 195          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.688e-83
Identity = 147/211 (69.67%), Postives = 170/211 (80.57%), Query Frame = 1
Query:   55 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            MGVYLSTPKTEK SEDG+N+ +++GLSSMQGWRATMEDAH+A  D+D+ TSFFGV+DGHGG+ VAKFCAKYLH++VL+ E YSAGDL  +A KAF RMDEMMRGQRGWREL  LGDK+++ SGMIEG IWSP+G ++ND  DDWA EE                GPHSDF GPT GSTACVAI+R+ QLVVANAGDSRCV+SR GQA NLS
Sbjct:    1 MGVYLSTPKTEKLSEDGENDKLKFGLSSMQGWRATMEDAHSALLDIDNDTSFFGVFDGHGGRVVAKFCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMMRGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFEE----------------GPHSDFAGPTCGSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLS 195          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.044e-82
Identity = 146/211 (69.19%), Postives = 168/211 (79.62%), Query Frame = 1
Query:   55 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            MG YLS+PKTEK SEDG+N+ +R+GLSSMQGWRATMEDAHAA  DLD  TSFFGVYDGHGGK VAKFCAKYLHQQV+ +E Y  GD+ TS ++AF RMD+MM+GQRGWRELA+LGDKM+KFSGMIEGFIWSP+ G+ N+  D W  E+                GPHSDF GPTSG TACVA+I+DK+L VANAGDSRCV+SRK QA NLS
Sbjct:    1 MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDLDDKTSFFGVYDGHGGKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDKMNKFSGMIEGFIWSPRSGDTNNQPDSWPLED----------------GPHSDFTGPTSGCTACVALIKDKKLFVANAGDSRCVISRKSQAYNLS 195          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.336e-80
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 1
Query:   55 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            MG+YLSTPKT+KFSEDG+N+ ++ GLSSMQGWRA MEDAH+A  +LD+ TSFFGV+DGHGG+ VAKFCAKYLH QVL+ E YSAGDL T+  +AF RMDEMMRGQRGWREL+ LGDK++K  GMIEG IWSP+G ++N+  DDW+ EE                GPHSDF GPT G TACVA+IR+ QLVVANAGDSRCV+SR GQA NLS
Sbjct:    1 MGIYLSTPKTDKFSEDGENDKLKLGLSSMQGWRANMEDAHSALLNLDNETSFFGVFDGHGGRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEE----------------GPHSDFAGPTCGCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLS 195          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.561e-78
Identity = 144/211 (68.25%), Postives = 164/211 (77.73%), Query Frame = 1
Query:   55 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            MGVYLSTPKTEK+S +G N+ +RYGL+SMQGWR TMEDAH A P LD  TSFFGVYDGHGGKAV+KFCAK+LH QVLK+E YS+GDL TS  K+F RMDEMM+GQRGWRELA LGDK  KF+GM+EG IWSPK GE++   D W  E                 GPHS F GPTSGSTACVAIIR+ +L+VANAGDSRCVLSRKG+A +LS
Sbjct:    1 MGVYLSTPKTEKYSGEGGNDRLRYGLASMQGWRTTMEDAHTALPRLDECTSFFGVYDGHGGKAVSKFCAKHLHLQVLKNEAYSSGDLATSVLKSFFRMDEMMKGQRGWRELAELGDKGQKFTGMLEGIIWSPKPGESDKPEDTWTEE-----------------GPHSHFPGPTSGSTACVAIIRNDELIVANAGDSRCVLSRKGRAYDLS 194          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 140.584 bits (353), Expect = 7.589e-33
Identity = 87/210 (41.43%), Postives = 120/210 (57.14%), Query Frame = 1
Query:   67 LSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS--STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGP-TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            L  P   K +  G N  + Y  S+MQG+R+TMEDAHA   +LD+  +TSFFGVYDGHGG AVA++CA +LH +VL+ E +S+ +L  + +++F RMDEM+R Q   +EL   G   +          W   G                   +LR      ++GP   + GP   G TACV +IR+ Q+VV NAGD+RCV+SR GQA+ LS
Sbjct:    8 LQVPDITKSTHSGGNTVLAYASSAMQGYRSTMEDAHATIENLDALTNTSFFGVYDGHGGSAVARYCANHLHNKVLEQEDFSS-NLANALRQSFFRMDEMLRNQAASKELTEYGSGNE---------YWRTAG-----------------RSWLR--CAPCVLGP--VYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALS 186          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32
Identity = 86/210 (40.95%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   70 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLS 687
            S P   KF+ + +N+ ++Y +SSMQGW   MEDAHAA  +LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL+ +    FL MDE ++    WREL I  D          G ++  K G     F                        P + + GP   GSTACV +IR  Q++V + GDSRCVLSR+ G A++LS
Sbjct:   28 SLPVESKFTFEEENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTTSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYH-NDLINALDNVFLSMDENLQQSDAWRELVIPHD---------NGCMYFLKAGVCAKPF------------------------PQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLS 203          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32
Identity = 86/210 (40.95%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   70 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLS 687
            S P   KF+ + +N+ ++Y +SSMQGW   MEDAHAA  +LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL+ +    FL MDE ++    WREL I  D          G ++  K G     F                        P + + GP   GSTACV +IR  Q++V + GDSRCVLSR+ G A++LS
Sbjct:    4 SLPVESKFTFEEENDRIKYVVSSMQGWGEKMEDAHAAILNLDDATSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYH-NDLINALDNVFLSMDENLQQSDAWRELVIPHD---------NGCMYFLKAGVCAKPF------------------------PQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLS 179          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.208e-32
Identity = 85/208 (40.87%), Postives = 115/208 (55.29%), Query Frame = 1
Query:   70 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            S P   KF+++ +N+ ++Y +SSMQGW   MEDAHAA  +LD + TSFFGVYDGHGG  VA +CAK  H ++  HE Y + +L  + + AF  MDE ++    WREL I  +          G+++  K G                      +   L   P + +  P+  GSTACV +IR  QL+V +AGDSRCVLSR GQA  LS
Sbjct:   53 SLPVESKFTDEKENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDS-NLSNAMRSAFYSMDEDLQLSDAWRELVIPRN---------NGWMYFIKAG----------------------VCANLSPFPQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALS 228          
BLAST of FC923433 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31
Identity = 82/207 (39.61%), Postives = 110/207 (53.14%), Query Frame = 1
Query:   70 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEYEQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLS 687
            S P   KF+++ +N+ ++Y +SSMQGW   MEDAHAA  +LD + TSFFGVYDGHGG  VA +CAK  H ++  HE Y + +L  + + AF  MDE ++    WREL I  +          G+++  K               Y +  +                     GSTACV +IR  QL+V +AGDSRCVLSR GQA  LS
Sbjct:  248 SLPVESKFTDEKENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDS-NLSNAMRSAFYSMDEDLQLSDAWRELVIPRN---------NGWMYFLKAAACT----SICKATYTEPAY--------------------EGSTACVVVIRGNQLIVGHAGDSRCVLSRNGQASALS 420          
The following BLAST results are available for this feature:
BLAST of FC923433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
P2C60_ARATH9.446e-8471.09Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C58_ORYSJ4.688e-8369.67Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C21_ARATH1.044e-8269.19Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C11_ORYSJ6.336e-8067.30Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C70_ORYSJ1.561e-7868.25Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C42_ORYSJ7.589e-3341.43Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
P2C17_ORYSJ1.295e-3240.95Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
P2C16_ORYSJ1.295e-3240.95Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
P2C20_ORYSJ2.208e-3240.87Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C19_ORYSJ7.103e-3139.61Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC31705A02EF StrClemenN Citrus clementina cDNA clone C31705A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923433 ID=FC923433; Name=FC923433; organism=Citrus clementina; type=EST; length=689bp
GCCCATCACTCACTCTTAACAGATCTCATTCTCTCTCTGCTCAAAGTAAA
GAAAATGGGGGTATATCTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGG
ATGGTCAAAATGAGAATGTTCGATATGGATTGTCGTCGATGCAGGGGTGG
CGTGCGACCATGGAAGATGCTCATGCAGCTTATCCAGATTTGGACAGTTC
TACATCTTTCTTTGGTGTTTATGATGGCCACGGTGGTAAAGCAGTGGCCA
AATTTTGTGCCAAGTATCTTCACCAGCAGGTGCTCAAACATGAAATTTAT
TCAGCTGGAGATTTAGTCACTTCAGCACAGAAAGCTTTTCTCAGAATGGA
TGAGATGATGCGTGGACAAAGGGGATGGAGAGAATTAGCTATACTGGGAG
ATAAAATGGACAAGTTTTCTGGCATGATTGAGGGGTTCATATGGTCTCCT
AAGGGTGGTGAAGCCAATGATCATTTTGACGATTGGGCATCGGAGGAGTA
CGAGCAACATGGCTTTCTGCGGTATCTTATCAACAGACTTTTGATTGGTC
CTCACTCAGATTTTCATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCA
ATCATTAGAGACAAGCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTG
TGTGTTATCGAGGAAGGGCCAGGCACTTAATCTATCTAA
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