FC923442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMOA_DICDI (ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20 Identity = 52/125 (41.60%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 289 QEERLRYLQQRLEVPFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLIQMLDLQSGKPS 663 Q R + + R V F+ EH L +LW L YPG +L SE WK+MG+QGT P TDFR G L+NLI+FA+ Y + F+++++ Q R E EYP A AGI ++F L + + G P+ Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSI-FKMGTPN 484
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMOC_DICDI (ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.013e-15 Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 277 LTPLQEERLRYLQQRLEVPFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLIQMLDL 645 +T Q + ++ L Q+ ++ + +H++ LK LW L YP +E KS LWK+ G+Q P+ DFRG G + L NLI + + D Q +L + + +YPFAVAGINIS ++ ++ + Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQK-KSPLWKKFGFQSDDPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ------DRDYPFAVAGINISNLIFEVFQI 472
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMOB_DICDI (ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.728e-15 Identity = 35/111 (31.53%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 310 LQQRLEVPFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLIQMLD 642 ++++ ++P+D + +EH+ +L++LW P S+ W +G+QG P+TDFRG G + L+NLI+F+ ++ + + +L + ++ YPFA+ GINI+ +++ ++D Sbjct: 110 IEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNLIYFSTQHSEDAREIL---KNSNSKCCYPFAITGINITALVLNLID 217
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMD2_HUMAN (ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 36/109 (33.03%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 331 PFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLIQMLDLQSGK 657 P+D ++H++ L +LW L P ++L S+ W E+G+QG P TDFRG G + L NL++F++ Y ++L + + + Y +A+ GIN++ M +L ++ K Sbjct: 119 PYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSN--HPKLGYSYAIVGINLTEMAYSLLKSEALK 225
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMD2_MOUSE (ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 35/109 (32.11%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 331 PFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLIQMLDLQSGK 657 P+D + +H+ L +LW L P ++L S+ W ++G+QG P TDFRG G + L NL++F++ Y ++L + + + Y +A+ GIN++ M +L ++ K Sbjct: 119 PYDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSN--HPKLGYSYAIVGINLTEMAYSLLKSEALK 225
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMD2_BOVIN (ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 35/109 (32.11%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 331 PFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLIQMLDLQSGK 657 P+D ++H+ L +LW L P ++L S+ W ++G+QG P TDFRG G + L NL++F++ Y ++L + + + Y +A+ GIN++ M +L ++ K Sbjct: 119 PYDSDNLQHEKLLIKLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSN--HPKLGYSYAIVGINLTEMAYSLLKSEALK 225
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMD1_PONAB (ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 331 PFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHK------QDGTRAEWE---------YPFAVAGINISFMLIQML 639 P+D +H++ L +LW+ P L S+ W E+G+QG P TDFRG G + L NL +FA++ + Q++L ++AEWE Y FA+ GINI+ + +L Sbjct: 126 PYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLL 243
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMD1_MOUSE (ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.875e-12 Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 331 PFDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHK------QDGTRAEWE---------YPFAVAGINISFMLIQML 639 P+D +H++ L +LW L P L S+ W E+G+QG P TDFRG G + L NL +FA++ Q++L ++ EWE Y FA+ GINI+ + +L Sbjct: 126 PYDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAIGYSFAIVGINITDLAYNLL 243
BLAST of FC923442 vs. ExPASy Swiss-Prot
Match: ELMD1_BOVIN (ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 334 FDGSQVEHQDALKQLWRLAYPGRELPPLKSELWKEMGWQGTGPSTDFRGGGFISLENLIFFAKKYPDSFQRLLHK------QDGTRAEWE---------YPFAVAGINISFMLIQML 639 +D +H++ L +LW+ P L S+ W E+G+QG P TDFRG G + L NL +FA++ + Q++L ++AEWE Y FA+ GINI+ + +L Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLL 243 The following BLAST results are available for this feature:
BLAST of FC923442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923442 ID=FC923442; Name=FC923442; organism=Citrus clementina; type=EST; length=763bpback to top |