FC923472

Overview
NameFC923472
Unique NameFC923472
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14473 contig Ccv1_Contig14473:1..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 6.967e-92
Identity = 158/190 (83.16%), Postives = 170/190 (89.47%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTR-GNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            G+   FDFHEK+LESEE LWDLYERWRSHHTVSRSL EKHKRFNVFK NVMHVH TNKMDKPYKLKLNKFADMTNHEF STYAGSK+ HH+MF+G++ G+GTFMY KV S+P+SVDWRKKG+VT VKDQGQCGSCWAFSTI AVEGIN I TNKLVSLSEQELVDCD   NQGCNGGLME AFEFIK+KG
Sbjct:   18 GVANSFDFHEKDLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKG 207          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 7.703e-91
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQ-GTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            I E FDFHEKELESEE LW LYERWRSHHTVSRSL EK KRFNVFK N MHVH  NKMDKPYKLKLNKFADMTNHEF +TY+GSK+KHHRMF+ G RGNGTFMY KV ++P+SVDWRKKG+VT+VKDQGQCGSCWAFSTI AVEGIN I TNKLVSLSEQELVDCDT  NQGCNGGLM+ AFEFIK++G
Sbjct:   17 ITESFDFHEKELESEESLWGLYERWRSHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRG 205          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.230e-88
Identity = 153/190 (80.53%), Postives = 164/190 (86.32%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGT-RGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            G+   FDFH+K+L SEE LWDLYERWRSHHTVSRSL EKHKRFNVFK N+MHVH TNKMDKPYKLKLNKFADMTNHEF STYAGSK+ H RMF+GT   NG FMY KV S+P SVDWRKKG+VT VKDQGQCGSCWAFST+ AVEGIN I TNKLV+LSEQELVDCD   NQGCNGGLME AFEFIK+KG
Sbjct:   18 GVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKG 207          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.974e-71
Identity = 129/191 (67.54%), Postives = 154/191 (80.63%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGN-GTFMYGKVTSIPS-SVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            I +   F EK+L SE+ LW+LYE+WR+HHTV+R LDEK++RFNVFK+NV  +H+ N K D PYKL LNKF DMTN EF S YAGSKI+HHR  +G + N G+FMY  V S+P+ S+DWR KG+VT VKDQGQCGSCWAFSTIA+VEGIN I T +LVSLSEQELVDCDT  N+GCNGGLM+ AFEFI+K G
Sbjct:   19 IAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKNG 209          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.881e-53
Identity = 104/183 (56.83%), Postives = 126/183 (68.85%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG--KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            +K+LESEE LWDLYERW+S H V R   EKH+RF  FK N   +H  NK  D PY+L LN+F DM   EF +T+ G  ++     +     G FMY    V+ +P SVDWR+KG+VT VKDQG+CGSCWAFST+ +VEGIN I T  LVSLSEQEL+DCDT  N GC GGLM+ AFE+IK  G
Sbjct:   33 DKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGD-LRRDTPSKPPSVPG-FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNG 213          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.881e-53
Identity = 104/183 (56.83%), Postives = 126/183 (68.85%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG--KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            +K+LESEE LWDLYERW+S H V R   EKH+RF  FK N   +H  NK  D PY+L LN+F DM   EF +T+ G  ++     +     G FMY    V+ +P SVDWR+KG+VT VKDQG+CGSCWAFST+ +VEGIN I T  LVSLSEQEL+DCDT  N GC GGLM+ AFE+IK  G
Sbjct:   33 DKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGD-LRRDTPAKPPSVPG-FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNG 213          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 6.174e-48
Identity = 95/183 (51.91%), Postives = 124/183 (67.76%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            +  ++LES + L +L+E W S+   +  +++EK  RF VFK N+ H+ +TNK  K Y L LN+FAD+++ EF   Y G K    R  +  R    F Y  V ++P SVDWRKKG+V  VK+QG CGSCWAFST+AAVEGIN I+T  L +LSEQEL+DCDT  N GCNGGLM+ AFE+I K G
Sbjct:   36 YSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDE-ERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNG 217          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.064e-47
Identity = 92/180 (51.11%), Postives = 122/180 (67.78%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            + L + + L +L+E W S H+ + +S++EK  RF VF++N+MH+ Q N     Y L LN+FAD+T+ EF   Y G  +   +  +  + +  F Y  +T +P SVDWRKKG+V  VKDQGQCGSCWAFST+AAVEGIN I T  L SLSEQEL+DCDT  N GCNGGLM+ AF++I   G
Sbjct:   39 EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTG 216          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44
Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRS---LDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKV-TSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            SE  +  +YE W   H  ++S   L EK +RF +FK N+  V + N+ +  Y+L L +FAD+TN E+ S Y G+K++     +G R        +V   +P S+DWRKKG+V  VKDQG CGSCWAFSTI AVEGIN I+T  L++LSEQELVDCDT  N+GCNGGLM+ AFEFI K G
Sbjct:   42 SEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEK----KGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNG 216          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 89/178 (50.00%), Postives = 115/178 (64.61%), Query Frame = 1
Query:  172 LYERWRSHHTVSRS-----LDEKHKRFNVFKQNVMHV--HQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG---KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            +Y RW   H  S S     ++++ +RFN+FK N+  +  H  N  +  YKL L  FA++TN E+ S Y G++ +  R     + N    Y     V  +P +VDWR+KG+V A+KDQG CGSCWAFST AAVEGIN I+T +LVSLSEQELVDCD   NQGCNGGLM+ AF+FI K G
Sbjct:    3 IYLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAK-NVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNG 179          
The following BLAST results are available for this feature:
BLAST of FC923472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CYSEP_VIGMU6.967e-9283.16Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_RICCO7.703e-9182.54Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSEP_PHAVU1.230e-8880.53Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP_HEMSP3.974e-7167.54Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSP2_HORVU4.881e-5356.83Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU4.881e-5356.83Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
XCP2_ARATH6.174e-4851.91Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
XCP1_ARATH3.064e-4751.11Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
RD21A_ARATH2.428e-4451.40Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP4_BRANA6.612e-4250.00Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionC31705D10EF StrClemenN Citrus clementina cDNA clone C31705D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923472 ID=FC923472; Name=FC923472; organism=Citrus clementina; type=EST; length=677bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTNGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGG
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