FC923502

Overview
NameFC923502
Unique NameFC923502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14483 contig Ccv1_Contig14483:1..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: YDG7_SCHPO (Uncharacterized oxidoreductase C26F1.07 OS=Schizosaccharomyces pombe GN=SPAC26F1.07 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.627e-42
Identity = 89/180 (49.44%), Postives = 125/180 (69.44%), Query Frame = 3
Query:  156 YFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG---FISLNPEDLL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            +F L +G+K+P +GLGTW+++P+    A+  A+ Q GYRHID A  YGNE E+G  +K   E GV  R+D+W+ SKLWC  HAPE VPKA+++TL+DL++DY+D YL+HWPV  K G   F      +L+  +  I  TWKAME L ++GK R IG+SNF+   L+ +L+VA+V PAV+Q
Sbjct:   15 HFTLADGSKIPGLGLGTWRSEPNQTKNAVKTAL-QYGYRHIDAAAIYGNEDEVGDGIK---ESGV-PRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQ 189          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.480e-42
Identity = 88/184 (47.83%), Postives = 125/184 (67.93%), Query Frame = 3
Query:  147 NVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKK-LFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPDI---PSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            +V+Y  L  G KMP IGLGTW++ P  V +A+  A+   GYRHIDCA+ YGNE E+G  +K+ +  D  +KRE++++ SKLW   H P+DV  A+ +TLQ+LQ+DY+DLYL+HWP   K+G      NP+  +Q D+     TWKAME L + G A+AIG+SNF+ +++ D+L +A V PAV Q
Sbjct:    4 SVEYETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALG-VGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKRGDQVFPQNPDGSVQYDLTDYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDILSIATVKPAVLQ 186          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.703e-41
Identity = 88/182 (48.35%), Postives = 116/182 (63.74%), Query Frame = 3
Query:  156 YFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            + ELNNG KMP +GLGTW++ P  V EA+ +AI   GYRHIDCA  Y NEKE+G  L++  ++ V+KR+DL+I SKLWC  H    V  A  +TL DLQ+DY+DLYL+HWP   K G  +  L+    + P   D   TW AME L D G  +AIGVSNF+  +++ +L     +  PAVNQ
Sbjct:    4 HLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDM-GYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_MOUSE (Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 3.793e-41
Identity = 87/182 (47.80%), Postives = 115/182 (63.19%), Query Frame = 3
Query:  156 YFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            + ELNNG KMP +GLGTW++ P  V EA+ +AI   GYRHIDCA  Y NEKE+G  L++  ++ V+KR+DL+I SKLWC  H    V  A  +TL DLQ+DY+DLYL+HWP   K G  +  L+    + P   D   TW AME L D G  + IGVSNF+  +++ +L     +  PAVNQ
Sbjct:    4 HLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAI-DLGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDKSMVKGAFQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEGLVKTIGVSNFNPLQIERILNKPGLKYKPAVNQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.441e-40
Identity = 85/183 (46.45%), Postives = 121/183 (66.12%), Query Frame = 3
Query:  150 VQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKK-LFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPDI---PSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            V+Y  L  G K+P IGLGTW++ P  V +A+  A+   GYRHIDCA+ YGNE E+G  +K+ +  D  + RE++++ SKLW   H P+DV  A+ +TLQDLQ+DY+DLYL+HWP   K+G      NP+  +Q D+     TWKAME L   G  +AIG+SNF+ +++ D++ +A V PAV Q
Sbjct:    5 VEYETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALG-VGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWPYAFKRGDQIFPQNPDGSVQYDLTDYKDTWKAMEKLVKQGLTKAIGLSNFNKRQIDDIISIATVKPAVLQ 186          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.882e-40
Identity = 87/181 (48.07%), Postives = 119/181 (65.75%), Query Frame = 3
Query:  156 YFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLF-EDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQ---PDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            +  L NG K+P IGLGTW+++P  V EA+  A+   GYRH+DCA  Y NE EIG   ++    + VIKREDL++ SKLW   H PEDV  A+ +TL DL++DY+DLYL+HWP   ++G      NP+  ++    D   TWKAME L + G A+AIG+SNF+ +++ D+L VA V PAV Q
Sbjct:    7 FVALYNGQKIPLIGLGTWKSEPGQVKEAVKYALS-VGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFERGDNLFPKNPDGTMRYDYTDYKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDVLSVATVKPAVLQ 186          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.594e-39
Identity = 85/185 (45.95%), Postives = 117/185 (63.24%), Query Frame = 3
Query:  141 NDNVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISL---NPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            N    YF L NG K+P IGLGTW++       A+  A+K AGYRHID A+ YGNEKEIG  ++   E GV  R D+W+ SKLWC  H    VP A+++TLQDL ++Y+D YL+HWP     G   L      +L+  D+P   TW+AME L ++GK R IG+SNF+ + L  +L++A+V P ++Q
Sbjct:    9 NAREAYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALK-AGYRHIDTAHIYGNEKEIGEGIR---ESGV-PRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQ 188          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 2.081e-39
Identity = 85/179 (47.49%), Postives = 115/179 (64.25%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            LNNGAKMP +GLGTW++ P  V EA+ +AI   GYRHIDCA+ Y NE E+G  +++   + V+KRE+L+I SKLWC  H    V  A  +TL DL++DY+DLYL+HWP   K G  F  L+    + P   +I  TW AME L D G  +AIG+SNF+  +++ +L     +  PAVNQ
Sbjct:    7 LNNGAKMPILGLGTWKSPPGQVTEAVKVAI-DVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 90/187 (48.13%), Postives = 120/187 (64.17%), Query Frame = 3
Query:  126 MGQIANDNVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPE--DLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            MGQ   D   +F L +G  MP +GLGTW+A  S  A ++  AI +AGYRH+D A  YG EKE+G  LK   E G I R+DL++ SK+WC + APE V  A++ TL+DLQ+DY+DLY +HWP R K G   + PE  ++L+ D+   WK ME L   G  + IGV N++V KL  LLR A++ PAV Q
Sbjct:    8 MGQGEQD---HFVLKSGHAMPAVGLGTWRAG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAG-IDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDG-AHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQ 188          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            L  GAKMP +GLGTW++ P  V EA+ +AI   GYRHIDCA+ Y NE E+G  L+   ++ V+KREDL+I SKLWC  H  + V  A  +TL DL++DY+DLYL+HWP   K G  F  L+ +  + P   D   TW AME L D G  +AIGVSNF+  +++ +L     +  PAVNQ
Sbjct:    6 LYTGAKMPILGLGTWKSPPGKVTEAVKVAI-DLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKDFFPLDEDGNVIPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQ 183          
The following BLAST results are available for this feature:
BLAST of FC923502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
YDG7_SCHPO2.627e-4249.44Uncharacterized oxidoreductase C26F1.07 OS=Schizos... [more]
AK1A1_XENLA4.480e-4247.83Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
ALDR_RAT1.703e-4148.35Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
ALDR_MOUSE3.793e-4147.80Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV... [more]
AK1A1_XENTR1.441e-4046.45Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_CHICK1.882e-4048.07Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
YBN4_SCHPO1.594e-3945.95Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
ALDR_HUMAN2.081e-3947.49Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
ALDR_HORVU2.718e-3948.13Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
ALDR_BOVIN2.718e-3948.04Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31705G05EF StrClemenN Citrus clementina cDNA clone C31705G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923502 ID=FC923502; Name=FC923502; organism=Citrus clementina; type=EST; length=734bp
GAATTTCTTTCCATGAATATGAAAATTTCTGCCATCTCCCCGCAAATTCA
ATCTCATCTCTCCACAAATTAAAAGGCCAGTGATCACTCACTGCCCCTGG
TCATTTCACACACATAACTTGGGAAATGGGCCAAATAGCAAACGATAACG
TTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGATTA
GGCACATGGCAGGCTAAACCTAGTGTTGTTGCCGAAGCCATTGCTATTGC
CATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATGGCA
ATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGAGTG
ATCAAGCGTGAGGATCTATGGATCGCCTCCAAGCTCTGGTGTTGTGATCA
TGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACTTGC
AGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACGAAG
AAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATATACC
AAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTCGAG
CTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTGAGA
GTTGCCCGTGTTACTCCTGCTGTTAACCAGTGGAATGCCACCCTGGATGG
CACAGGAAAGCTACATGATTTTGCAATCCAAGGG
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