FC923503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923503 vs. ExPASy Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.735e-41 Identity = 104/192 (54.17%), Postives = 120/192 (62.50%), Query Frame = 3 Query: 123 MSSPYNSNWIFDCGLLDG------IGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFDDSFGNLDAFKETGSRKRVXXXXXXXXXXXXXXEKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS-QPAFLPHPP 677 M SP N+NWI C L+D I G P P V SS S SA D S GN +A KE GS+KR EK RRDRLND+FMEL +IL+PG PPK DK +L DAV+MVTQLR EAQKLK SN +L KI ELK EKNELRDEKQRLK EKE LE+Q+KA+++ QP+F P PP Sbjct: 1 MVSPENANWI--CDLIDADYGSFTIQGPGFSWPVQQPIGV---SSNS----SAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPP 183
BLAST of FC923503 vs. ExPASy Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.121e-36 Identity = 88/188 (46.81%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 123 MSSPYNSNWIFDCGLLDGIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFDDSFGNLDAFKETGSRKRVXXXXXXXXXXXXXXEKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS----QPAFLPHP 674 M SP N+NW+ D L++G S P W S +S E D + D KE SRKR+ EK RRDRLND+F EL+S+L+PGR PK DK ++ DA++MV Q RDEAQKLK N +L KI ELK EKNELRDEKQ+LK EKE +++Q+KA+ + QP FLP+P Sbjct: 1 MVSPENTNWLSDYPLIEGAF-------SDQNPTFPWQIDGS-ATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNP 180
BLAST of FC923503 vs. ExPASy Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.874e-26 Identity = 60/135 (44.44%), Postives = 88/135 (65.19%), Query Frame = 3 Query: 291 DAFKETGSRKRVXXXXXXXXXXXXXXEKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENLERQVKAL-SSQPAFLPHPPPVRLH 692 + F+E S KR EK+RR++LND+FM+L+S+L+PGR PK DK+ +L DA+++V QLR EA +L+ +N+ LL +I LK +KNELR+EK LK EKE +E+Q+K++ P F+P P H Sbjct: 145 EEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFH 279
BLAST of FC923503 vs. ExPASy Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.400e-25 Identity = 55/109 (50.46%), Postives = 82/109 (75.23%), Query Frame = 3 Query: 369 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS-QPAFLPHPPPVRLH 692 E++RR++LN+RFM+L+S+L+PGR PK DK +L DA++++ QLRDEA KL+ +N+ LL +I LK EKNELR+EK LK +KE E+Q+K++++ F+PH P H Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFNH 247
BLAST of FC923503 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15 Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 369 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENL----ERQVKALSSQPAFLPH-----PPP 680 EK+RR++LN+ F+EL ++LDP RP K DK +L D VQ++ +L E KLK L + EL EKN+LR+EK LK++ ENL +++++++S A + H PPP Sbjct: 67 EKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPP 178
BLAST of FC923503 vs. ExPASy Swiss-Prot
Match: BH011_ARATH (Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 369 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENLERQVK-ALSSQPAFLPH 671 EK+RRD+L ++F+EL + LDP RP K DK +L D +QM+ + ++ +LK E L + EL EK+ELR+EK LK++ E L Q + + + ++PH Sbjct: 53 EKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWVPH 153 The following BLAST results are available for this feature:
BLAST of FC923503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923503 ID=FC923503; Name=FC923503; organism=Citrus clementina; type=EST; length=728bpback to top |