FC923505

Overview
NameFC923505
Unique NameFC923505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14513 contig Ccv1_Contig14513:415..1102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.971e-49
Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 3
Query:    3 YVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGHGFF-GGKAVVESVPADSFLVLFP 389
            YVR  CEASLKRLD+D IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD+EEEIIP CRELGIGIV YSPLG GF   G  ++E +  + +    P
Sbjct:  113 YVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLP 242          

HSP 2 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 2
Query:  527 YKHFLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPG 688
            Y+ +LPRF+ ENL+ NK++Y RI  +A +  CT +QLALAWV  QG+DV PIPG
Sbjct:  237 YRKYLPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPG 290          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.280e-48
Identity = 94/125 (75.20%), Postives = 102/125 (81.60%), Query Frame = 3
Query:    3 YVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGHGFF-GGKAVVESVPADSF 374
            YVR  CE S KRL VD IDLYYQHR+D  VPIE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD EE+IIP CRELGIGIV YSPLG GFF  G  +V+S+    F
Sbjct:  108 YVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDF 232          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25
Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 3
Query:    3 YVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE---IIPLCRELGIGIVPYSPLGHGFFGG 338
            Y+    + SLKRL +D IDLYY HR     PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I IV Y+PLG GF  G
Sbjct:  103 YIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTG 217          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 3
Query:   54 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGHGFFGGK-AVVESVPADSFLVLFPINVYPHHF 413
            +DL+   RVD +VPIE T+  +K  V+ GKI  +GLSE S +TI+RAHAV PI AV++E+SL++RDIE   I+ +CR+L I I+ YSP   G   G+   VE +    F   FP   Y   F
Sbjct:  117 LDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDL--KEFAKSFPFLEYLDRF 236          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19
Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 3
Query:    3 YVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGHGFFGGKAVVESV 359
            ++R   E SLKRL  DYIDLYY H  D   P+ E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E+E++P C + GI  +PY PL  G   GK   ++V
Sbjct:  104 FLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTV 222          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 3
Query:   54 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGHGFFGGKAVVESVPADSFLVLFP 389
            +DL+   RVD  VPIE T+  +K  V+ G+I  +GLSEAS ++I+RA A+ PI AV+ E+SL++RDIE+  I+  C +L I I+ Y+P  HG   G+ V  +     F+  FP
Sbjct:  117 LDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGR-VKTAEDLKDFIKAFP 228          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: NORA_ASPFL (Norsolorinic acid reductase OS=Aspergillus flavus GN=norA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 3
Query:    6 VRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGHGFF 332
            +RL  +ASL++L  DYIDL Y H  D +  +EE +  +  LV  GK+ Y+G+S+         +   RA+ + P +  Q  WS   RD E +I+P+C   G+G+ P+  LG G F
Sbjct:  126 LRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSCAFRDFERDILPMCESEGMGLAPWGVLGRGQF 240          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: NORA_ASPPA (Norsolorinic acid reductase OS=Aspergillus parasiticus GN=norA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 3
Query:    6 VRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGHGFF 332
            +RL  +ASL++L  DYIDL Y H  D +  +EE +  +  LV  GK+ Y+G+S+         +   RA+ + P +  Q  WS   RD E +I+P+C   G+G+ P+  LG G F
Sbjct:  126 LRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSSAFRDFERDILPMCESEGMGLAPWGVLGRGQF 240          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 3
Query:   27 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI-------RRAHAVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGHGFFGGKAVVESVPADSFLVL 383
            SLKRLD+DY+D+ Y HR D + P+EET+  M  +++ G   Y G SE S   I        R   V PI   Q E++L++R  +E E +PL    G+G+  +SPL  G   GK    ++PADS   L
Sbjct:  107 SLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVE-QPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASGVLTGKYAKGNIPADSRFAL 232          
BLAST of FC923505 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 3
Query:   21 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGHGFFGGKAVVE 353
            E SLKRL  DYIDLY  H  D  VPIEET   MK+L + GKI+ IG+S  S + +    AV P+  +Q  ++L+ R++EE ++P  ++  I  + Y  L  G   GK   E
Sbjct:  108 ENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEE 218          
The following BLAST results are available for this feature:
BLAST of FC923505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
A115_TOBAC1.971e-4973.08Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE8.280e-4875.20IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO1.519e-2552.17Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO2.125e-1945.90Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YCCK_BACSU2.776e-1942.02Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
PLR2_SCHPO1.989e-1743.36Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
NORA_ASPFL3.751e-1636.52Norsolorinic acid reductase OS=Aspergillus flavus ... [more]
NORA_ASPPA4.899e-1636.52Norsolorinic acid reductase OS=Aspergillus parasit... [more]
KCAB_ORYSJ6.399e-1639.37Probable voltage-gated potassium channel subunit b... [more]
GS69_BACSU1.425e-1541.44General stress protein 69 OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31705G08EF StrClemenN Citrus clementina cDNA clone C31705G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923505 ID=FC923505; Name=FC923505; organism=Citrus clementina; type=EST; length=688bp
ATTACGTGCGCTTGTGTTGTGAAGCTAGCCTGAAGCGACTTGATGTGGAT
TACATTGATCTATATTATCAACATAGAGTGGACACATCAGTCCCCATAGA
GGAAACCATTGGTGAAATGAAGAAGCTGGTGGAAGAGGGTAAAATCAAGT
ACATTGGATTATCTGAGGCCAGCCCAGACACAATTAGGAGAGCACATGCT
GTTCATCCCATCACAGCTGTACAAATGGAATGGTCCCTCTGGACTCGTGA
TATTGAGGAAGAGATAATACCCCTCTGCAGGGAACTCGGCATTGGAATAG
TTCCATACAGTCCTCTTGGTCATGGATTTTTTGGTGGCAAAGCTGTTGTG
GAGAGTGTACCTGCGGATAGCTTTTTGGTACTTTTTCCGATCAATGTTTA
TCCGCATCATTTTGTTTCCTAAGTCAGTACTATATAAAATGTTTTAAACT
AGCAAAAGTAGTCTTACAGTTTCTTTAACTGTTTTATATATCGTCGTACA
TATGAAAATGATACATGTATTTGTTTTATAAGCATTTTCTTCCTAGGTTC
AAAGGAGAGAACCTGGACAGGAACAAGAGTATTTATTTTCGCATAGAGAA
CCTTGCCAAAAAGTACAATTGCACTTCTGCTCAACTAGCCCTAGCATGGG
TTCTTGGACAGGGGGATGATGTCGTACCTATCCCCGGG
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