FC923512

Overview
NameFC923512
Unique NameFC923512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9472 contig Ccv1_Contig9472:301..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: BEM46_SCHPO (Protein bem46 OS=Schizosaccharomyces pombe GN=bem46 PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36
Identity = 89/198 (44.95%), Postives = 124/198 (62.63%), Query Frame = 2
Query:    5 RIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQ-PILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEH 595
            R+    L+ NVF++SYRGYG+S G PS+ G+  D+Q ALE+L +      T+IVV+G+S+GGAV   LT  N D+++ALILENTFTSI DM   + P+     GGS      I++      WS+ D + +IK+ P+LFLSG +DE+VPP  M +L+    +  K  KF  FP   H DT L  GD Y++ I +FLAE+
Sbjct:  110 RVFYSALNMNVFIISYRGYGKSTGSPSEAGLKIDSQTALEYLMEHPICSKTKIVVYGQSIGGAVAIALTAKNQDRISALILENTFTSIKDMIPTVFPY-----GGS------IISRFCTEIWSSQDEIRKIKKLPVLFLSGEKDEIVPPPQMVLLFGLCGSAKK--KFHSFPKCTHNDTCL--GDGYFQVIADFLAEN 292          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: ABHDD_DANRE (Abhydrolase domain-containing protein 13 OS=Danio rerio GN=abhd13 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 80/207 (38.65%), Postives = 122/207 (58.94%), Query Frame = 2
Query:    8 IMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRKKKESETS 625
            +ML  L  NV ++ YRGYG+S+G PS+ G+ +DA+A L+++  R DID T++V+FGRSLGGAV   L   NP +VAA+++ENTF SI  MA  L  F             R L  +  ++ + +   V   + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E ++     ET+
Sbjct:  136 LMLVNLKANVVLVDYRGYGKSEGDPSEDGLYQDAEATLDYVMTRPDIDKTKVVLFGRSLGGAVAIRLASCNPHRVAAIMVENTFLSIPHMAATLFSFFPM----------RYLPLWCYKNKFLSYRHVVPCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTK--RLAIFPEGTHNDTWQCQG--YFSALEQFMKELLKSHAREETT 328          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: ABHDD_XENLA (Abhydrolase domain-containing protein 13 OS=Xenopus laevis GN=abhd13 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.223e-31
Identity = 75/196 (38.27%), Postives = 115/196 (58.67%), Query Frame = 2
Query:    8 IMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAE 592
            +ML  L  N+ ++ YRGYG+SDG PS+ G+  D++A L+++  R DID T+I++FGRSLGGAV   L   N  ++ AL+LENTF SI  MA  L   L            R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E
Sbjct:  136 LMLVNLKVNLILVDYRGYGKSDGEPSEEGLYMDSEAVLDYVMTRPDIDKTKIILFGRSLGGAVAIHLASENAHRICALVLENTFLSIPHMASTLFSVLPM----------RYLPLWCYKNKFLSYRKIVQCRMPSLFISGLSDQLIPPFMMKQLYELSPSRTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKE 317          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: ABHDD_CHICK (Abhydrolase domain-containing protein 13 OS=Gallus gallus GN=ABHD13 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.035e-30
Identity = 75/212 (35.38%), Postives = 121/212 (57.08%), Query Frame = 2
Query:    8 IMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRKKKESE---TSGN 631
            +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R+D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F             R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + AR K  +   FP G H DTW   G  Y+ ++++F+ E ++     E   TS N
Sbjct:  136 LMLVNLKVNLILVDYRGYGKSEGEASEEGLYIDSEAVLDYVMTRSDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM----------RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPARTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKEVIKSHSSEEMAKTSSN 333          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: ABHDD_HUMAN (Abhydrolase domain-containing protein 13 OS=Homo sapiens GN=ABHD13 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.012e-30
Identity = 75/212 (35.38%), Postives = 120/212 (56.60%), Query Frame = 2
Query:    8 IMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRKKKESE---TSGN 631
            +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F             R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E V+     E   TS N
Sbjct:  136 LMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM----------RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKEVVKSHSPEEMAKTSSN 333          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: ABHDD_MOUSE (Abhydrolase domain-containing protein 13 OS=Mus musculus GN=Abhd13 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 72/212 (33.96%), Postives = 122/212 (57.55%), Query Frame = 2
Query:    8 IMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRK---KKESETSGN 631
            +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R D+D T++ +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F             R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E ++    +  ++TS N
Sbjct:  136 LMLVNLRVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM----------RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKEVIKSHSPEDMTKTSSN 333          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: YN60_YEAST (Uncharacterized membrane protein YNL320W OS=Saccharomyces cerevisiae GN=YNL320W PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29
Identity = 76/199 (38.19%), Postives = 106/199 (53.27%), Query Frame = 2
Query:    2 VRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEI--KQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAE 592
            + I  ++   +VF+ SYRGYG S+G PS+ G+  DA   + HLS  +     ++V++GRSLGGA    +     D    +ILENTF SI  +   + P LK F              L    W++  ++G    + P LFLSGL+DE+VPP HM+ LY    + NK  K  EFP G H DT +  G  YW  I++FL E
Sbjct:   98 IDIFYRQFGMSVFIYSYRGYGNSEGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGGANALYIASKFRDLCDGVILENTFLSIRKVIPYIFPLLKRF------------TLLCHEIWNSEGLMGSCSSETPFLFLSGLKDEIVPPFHMRKLYETCPSSNK--KIFEFPLGSHNDTIIQDG--YWDIIRDFLIE 280          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: Y2307_MYCTU (Uncharacterized protein Rv2307c/MT2364 OS=Mycobacterium tuberculosis GN=Rv2307c PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20
Identity = 65/195 (33.33%), Postives = 98/195 (50.26%), Query Frame = 2
Query:    8 IMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAE 592
            + L  L  +V +  YRGYG + G PS+ G+  DA+AA E LS ++D+D  RI  FG SLG AV   L    P   AAL+L + FTS+ ++  V  P+L              L  L+   + +I+ +  +  P+L ++G  D++VP +  + L A AA      ++V  P   H D  L  G     +I+ FL E
Sbjct:   99 VALHGLGLSVLLFDYRGYGGNPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFGESLGAAVAVGLAVQRPP--AALVLRSPFTSLAEVGAVHYPWLP-------------LRRLLLDHYPSIERIASVHAPVLVIAGGSDDIVPATLSERLVAAAAEPK---RYVVVPGVGHNDPELLDGRVMLDAIRRFLTE 275          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: YHFR_ECO57 (Uncharacterized protein yfhR OS=Escherichia coli O157:H7 GN=yhfR PE=3 SV=4)

HSP 1 Score: 94.7449 bits (234), Expect = 5.330e-19
Identity = 59/188 (31.38%), Postives = 103/188 (54.79%), Query Frame = 2
Query:   32 NVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGA-VGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQ-PILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWL-AGGDQYWRSIQEFL 586
            NVFM  YRG+G+S G PSQ G+  D Q+A+  +  R+D++  R+V+FG+S+GGA + AV+ + + + + A+IL++TF S   +A  ++P       GSG        +L+   +S  + +  +   P+L + G  D ++P  H + LY+ A    +  + +  P G H+D +    GD Y   +  F+
Sbjct:  107 NVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILAVIGQGDREGIRAVILDSTFASYATIANQMIP-------GSG--------YLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLA---KEPKRLILIPDGEHIDAFSDRHGDVYREQMVNFI 276          
BLAST of FC923512 vs. ExPASy Swiss-Prot
Match: YFHR_ECOLI (Uncharacterized protein yfhR OS=Escherichia coli (strain K12) GN=yfhR PE=3 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 1.187e-18
Identity = 58/188 (30.85%), Postives = 103/188 (54.79%), Query Frame = 2
Query:   32 NVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGA-VGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQ-PILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWL-AGGDQYWRSIQEFL 586
            NVFM  YRG+G+S G PSQ G+  D Q+A+  +  R+D++  R+V+FG+S+GGA +  V+ + + + + A+IL++TF S   +A  ++P       GSG        +L+   +S  + +  +   P+L + G  D ++P  H + LY+ A    +  + +  P G H+D +    GD Y   + +F+
Sbjct:  107 NVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIP-------GSG--------YLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLA---KEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFI 276          
The following BLAST results are available for this feature:
BLAST of FC923512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
BEM46_SCHPO1.263e-3644.95Protein bem46 OS=Schizosaccharomyces pombe GN=bem4... [more]
ABHDD_DANRE2.911e-3338.65Abhydrolase domain-containing protein 13 OS=Danio ... [more]
ABHDD_XENLA1.223e-3138.27Abhydrolase domain-containing protein 13 OS=Xenopu... [more]
ABHDD_CHICK1.035e-3035.38Abhydrolase domain-containing protein 13 OS=Gallus... [more]
ABHDD_HUMAN3.012e-3035.38Abhydrolase domain-containing protein 13 OS=Homo s... [more]
ABHDD_MOUSE1.145e-2933.96Abhydrolase domain-containing protein 13 OS=Mus mu... [more]
YN60_YEAST9.690e-2938.19Uncharacterized membrane protein YNL320W OS=Saccha... [more]
Y2307_MYCTU6.296e-2033.33Uncharacterized protein Rv2307c/MT2364 OS=Mycobact... [more]
YHFR_ECO575.330e-1931.38Uncharacterized protein yfhR OS=Escherichia coli O... [more]
YFHR_ECOLI1.187e-1830.85Uncharacterized protein yfhR OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionC31705H03EF StrClemenN Citrus clementina cDNA clone C31705H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923512 ID=FC923512; Name=FC923512; organism=Citrus clementina; type=EST; length=734bp
GGTTCGCATAATGTTACAAAGGTTGCACTGCAATGTATTCATGCTTTCAT
ATCGTGGTTATGGAGAAAGTGATGGCTATCCTTCTCAGCATGGAATTACA
AGGGATGCTCAGGCAGCATTGGAGCATCTTTCTCAAAGGACCGATATAGA
CACGACTAGAATAGTTGTATTTGGGAGATCACTAGGAGGTGCCGTTGGAG
CTGTGCTTACTAAGAATAATCCGGATAAGGTCGCTGCACTGATACTGGAG
AATACTTTCACATCAATACTGGACATGGCTGGAGTTCTTCTGCCATTCCT
GAAGTGGTTTATTGGGGGCAGTGGTTCAAAAGGTCCAAGAATTCTTAATT
TTCTTGTACGCTCTCCTTGGAGTACAATTGATGTTGTTGGTGAGATTAAG
CAGCCAATCCTTTTTCTCTCTGGGTTGCAAGATGAGATGGTTCCTCCATC
ACACATGCAAATGCTGTATGCTAAAGCAGCTGCTCGTAACAAGCATTGCA
AATTTGTGGAATTTCCTACTGGCATGCATATGGATACTTGGTTGGCTGGT
GGTGATCAGTATTGGAGATCAATTCAGGAGTTCCTGGCAGAACATGTTAG
AAAGAAAAAGGAAAGTGAAACGTCAGGCAATGACAATGATTCCGAGGGGA
GGTGACTGGTGTTGACATGCAAACTATTGGGTTTTATTGATTGTCTCACA
CAAGGATCTCAAACAATTTCTGCCTTTTTCATTT
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