FC923538

Overview
NameFC923538
Unique NameFC923538
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13747 contig Ccv1_Contig13747:1159..1815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CA069_HUMAN (Putative transferase C1orf69, mitochondrial OS=Homo sapiens GN=C1orf69 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.316e-23
Identity = 74/196 (37.76%), Postives = 97/196 (49.49%), Query Frame = 2
Query:    2 LGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAPGSEVIDAESGKKAGKVTTALGCRGLGVLRLEEVLKESGALTIQGQE--DVRVEAIRPNWWP 583
            +G+R + +  G P LV   +  D  +Y   R  QGV EG  ++P G A+PLE NLA +N +SF KGCY+GQEL ARTHH GVIRKRL P+RFLD                                      + PG+ V+ A SG+  GK     G  GL +L  E++    G L I+  E   V + A  P+WWP
Sbjct:  194 MGWRLLTQDEG-PALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSG--------------------------------ITPGATVLTA-SGQTVGKFRAGQGNVGLALLWSEKI---KGPLHIRASEGAQVALAASVPDWWP 352          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_USTMA (Putative transferase CAF17, mitochondrial OS=Ustilago maydis GN=CAF17 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.114e-22
Identity = 73/212 (34.43%), Postives = 108/212 (50.94%), Query Frame = 2
Query:    2 LGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQK-VAPGSEVIDAES-GKKAGKVTTALGCRGLGVLRLEEVLK----------------ESGALTIQGQEDVRVEAIRPNWWP 583
            +G+RG+  ++ I  +  A    D + Y L R+  GVAEG+ + P+  ++PLE NL  ++ + F KGCYVGQEL ARTHH GV+RKR++PL F    G     SI      +   +  QL ++    AE+  K ++  SE     + GK AGK T+ +   GL  LRLE+V +                E   L+  G+  +      P+WWP
Sbjct:  189 IGYRGVLSAAEILDVAAAASTVDGLEYTLHRITNGVAEGALDFPQASSLPLENNLDYMHGVDFRKGCYVGQELTARTHHTGVVRKRIVPLSFY-LAGTPPPASI----HDVDPAFPHQLPTH---LAEIRSKPISTASEAATKPARGKAAGKFTSGVYNVGLACLRLEQVRRWADSSSADPNSKHDALEFSVLSADGETTLLARPWIPSWWP 392          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CA069_MOUSE (Putative transferase C1orf69 homolog, mitochondrial OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.455e-22
Identity = 71/196 (36.22%), Postives = 97/196 (49.49%), Query Frame = 2
Query:    2 LGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAPGSEVIDAESGKKAGKVTTALGCRGLGVLRLEEVLKESGALTIQGQED--VRVEAIRPNWWP 583
            +G+R + +  G P LV   +  D  +Y   R +QG+ EG  ++P G A+PLE NL  +N +SF KGCY+GQEL ARTHH GVIRKRL P++       G   +                             V+PG+ V    +G+ AGK     G  GL +LR E +    G L I+  E   V V A+ P+WWP
Sbjct:  195 MGWRLLTQDDG-PALVPRGQLGDLQDYHKYRYQQGIPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKL-----EGPLPA---------------------------SGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETI---KGPLHIKTSESQLVAVTAVVPDWWP 354          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CA069_DANRE (Putative transferase C1orf69 homolog, mitochondrial OS=Danio rerio GN=ch1073-162b20.1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22
Identity = 71/195 (36.41%), Postives = 94/195 (48.21%), Query Frame = 2
Query:    2 LGFRGIFKSSGIP-PLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAPGSEVIDAESGKKAGKVTTALGCRGLGVLRLEEVLKESGALTIQGQEDVRVEAIRPNWWP 583
            +G+R I  +   P  +V A +  +   Y   R E G+ EG  ++P GEA+PLE NL  +  ISF KGCY+GQEL ARTHH GVIRKRL+P+                                    +   +K+  GS  +  E GK AGK  T +   GL ++RL    KE+  L   G E V V A  P+WWP
Sbjct:  190 MGWRMITSAQDNPLDIVSACRLGNTEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVIRKRLMPVS----------------------------------LSAPAEKLNQGS-ALQTEGGKPAGKYRTGVDKLGLSLVRLAHA-KETLQLKSSGDETVTVLASVPDWWP 348          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_ASPNC (Putative transferase caf17, mitochondrial OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=caf17 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 2
Query:   62 ETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAP-GSEV--IDAESGKKAGKVTTALGCRGLGVLRLEEVLKESGALTIQGQEDVRVEAIRPNWWPAE 589
            E D  +Y + R+  GVAEG +EI +  A+PLE N+  +  I F KGCYVGQEL  RTHH GV+RKR+LP++  +                   +  L+ A        +E ++ P GS +  + A  G+ AGK    +G  GL + RLE  +    ALT +G +    +  + +W  AE
Sbjct:  228 EVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRTHHTGVVRKRILPVQLYEGS-----------------LGDLESADMPVYDPSVEVELPPSGSNISKVSARKGRSAGKFLGGVGNIGLALCRLE--MMTDVALTGEGTQYSPDQEFKVSWTGAE 387          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_NEUCR (Putative transferase caf-17, mitochondrial OS=Neurospora crassa GN=caf-17 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-15
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 2
Query:   23 KSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLP 268
            ++S   PL + D  T E +Y L R   G+ EG +EI  G A+PLE N+  +N I F KGCYVGQEL  RT HRGV+RKR+LP
Sbjct:  206 QTSSSSPLTDGDL-TPESSYHLRRFLLGIPEGQSEIISGTALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILP 286          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_MAGGR (Putative transferase CAF17, mitochondrial OS=Magnaporthe grisea GN=CAF17 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15
Identity = 66/194 (34.02%), Postives = 87/194 (44.85%), Query Frame = 2
Query:   65 TDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAPGSEVIDA-ESGKKAGKVTTALGCRGLGVLRLE-----------EVLKESG----ALTIQGQEDV-------RVEAIRPNW 577
            T E +Y + R  QGVAEG TEI +  A+P E N+    AI F KGCYVGQEL  RT HRGV+RKR+LP    D+      L       +                    + V P + +  A + G+  GK  + +G  GL + RLE               ESG     LT +  EDV       +V+A  P+W
Sbjct:  202 TPETSYRIRRYLQGVAEGQTEILREHALPAESNMDVTGAIDFRKGCYVGQELTIRTRHRGVVRKRILPCVLYDHFAAPERLEYKHDGVV------------------TAEGVPPETSIGRATKRGRSTGKWLSGVGNIGLALCRLEIMTDLTLPGEPAAALESGNDEFVLTPKSDEDVGSEGAPFKVKAFVPDW 377          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_NEOFI (Putative transferase caf17, mitochondrial OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=caf17 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 8.552e-15
Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 2
Query:   53 ADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAPGSEVIDAESGKKAGKVTTALGCRGLGVLRLEEVLKESGALTIQGQEDVRVEAIRPNW 577
            A  E D   Y + R+  G+AEG  EI +  A+PLE N+  +  + F KGCYVGQEL  RTHH GV+RKR++P++        +  +  +  T    + +    SN                 +D   G+ AGK    +G  GL + RLE  +     LT +G +    +  + +W
Sbjct:  225 AGSEVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHTGVVRKRIVPVQLYAKSPLPSGETPVYDPTAA--VALPPSGSNI--------------SKVDGRKGRSAGKFLGGVGNIGLALCRLE--IMTDIVLTGEGSQSSPEQEFKISW 381          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_ASPFU (Putative transferase caf17, mitochondrial OS=Aspergillus fumigatus GN=caf17 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 2
Query:   53 ADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLRFLDNRGNGNFLSIWFQYTILFYIYVLQLASNFFLFAELEQKVAP-GSEV--IDAESGKKAGKVTTALGCRGLGVLRLE 499
            A  + D   Y + R+  G+AEG  EI +  A+PLE N+  +  + F KGCYVGQEL  RTHH GV+RKR++P++   N                      Q              + P GS +  +D   G+ AGK    +G  GL + RLE
Sbjct:  225 AGSQVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHTGVVRKRIVPVQLYANSAP-------------------QSGDTPVYDPSAAVALPPSGSNISKVDGRKGRSAGKFLGGVGNIGLALCRLE 357          
BLAST of FC923538 vs. ExPASy Swiss-Prot
Match: CAF17_YARLI (Putative transferase CAF17, mitochondrial OS=Yarrowia lipolytica GN=CAF17 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.250e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 2
Query:    2 LGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLR 274
            LG R I  +        A    +   Y + R  +G  EGS EIP  +A+P+E +L  +N + F++GCYVGQEL  RTHH GV+RKR++P +
Sbjct:  212 LGIRMILPAKTSTTYFSAIPSANLTQYNMLRYIRGTPEGSREIPPNKALPMESDLDYMNGLDFNRGCYVGQELTIRTHHTGVVRKRIVPFQ 302          
The following BLAST results are available for this feature:
BLAST of FC923538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CA069_HUMAN1.316e-2337.76Putative transferase C1orf69, mitochondrial OS=Hom... [more]
CAF17_USTMA1.114e-2234.43Putative transferase CAF17, mitochondrial OS=Ustil... [more]
CA069_MOUSE1.455e-2236.22Putative transferase C1orf69 homolog, mitochondria... [more]
CA069_DANRE9.434e-2236.41Putative transferase C1orf69 homolog, mitochondria... [more]
CAF17_ASPNC1.410e-1734.64Putative transferase caf17, mitochondrial OS=Asper... [more]
CAF17_NEUCR1.319e-1552.44Putative transferase caf-17, mitochondrial OS=Neur... [more]
CAF17_MAGGR2.939e-1534.02Putative transferase CAF17, mitochondrial OS=Magna... [more]
CAF17_NEOFI8.552e-1530.86Putative transferase caf17, mitochondrial OS=Neosa... [more]
CAF17_ASPFU1.459e-1433.55Putative transferase caf17, mitochondrial OS=Asper... [more]
CAF17_YARLI3.250e-1441.76Putative transferase CAF17, mitochondrial OS=Yarro... [more]

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Properties
Property NameValue
Genbank descriptionC31706B11EF StrClemenN Citrus clementina cDNA clone C31706B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923538 ID=FC923538; Name=FC923538; organism=Citrus clementina; type=EST; length=655bp
TCTTGGATTTAGGGGAATCTTCAAATCTAGTGGAATACCACCTCTCGTTG
AGGCTGACAAAGAAACCGATGAGATGAATTATCTTTTATGCAGATTAGAG
CAGGGAGTTGCCGAAGGCTCAACTGAAATACCAAAAGGGGAGGCAATGCC
ACTAGAATACAATCTTGCTGGTCTAAATGCAATAAGCTTTGACAAAGGTT
GTTATGTCGGTCAAGAGTTAATAGCTCGCACACACCATCGTGGGGTTATT
CGAAAGCGTTTGCTTCCACTGAGGTTTCTTGATAATAGAGGAAATGGTAA
TTTTCTTTCCATTTGGTTTCAGTATACTATTCTTTTTTATATTTATGTGT
TGCAACTTGCAAGCAATTTCTTTCTCTTTGCAGAACTGGAGCAGAAAGTT
GCTCCTGGCTCAGAAGTGATTGACGCTGAATCTGGCAAAAAGGCTGGAAA
GGTGACAACTGCTCTAGGCTGTCGTGGCCTTGGTGTCCTGCGGTTGGAGG
AAGTCTTAAAAGAATCAGGTGCATTGACCATTCAAGGGCAGGAAGATGTT
AGAGTTGAGGCCATCAGACCAAACTGGTGGCCTGCTGAGTGGCTTCAGAG
AATCACAGCATAGTGTCGCTGCTTAAGAGTTTATATCTAGAGGGTAGGGC
TACGT
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