FC923540

Overview
NameFC923540
Unique NameFC923540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14405 contig Ccv1_Contig14405:40..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_DANRE (Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAV-----PQYNDRNHSQ-DKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEA-PG*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EKRK     GYGTQ  RLGKD+IK FD C L L+P  DP+  + G+++ KE IL+ +L QK +I +K+ A+                 ++    + F Q+ +  V     P  + ++  + ++NG   ++S   +S E  +   + +FW+PS TPEA P  ++ PS +  CP     LK+  L  V
Sbjct:    3 RHGKNCTAGAVYTYHEKRKDTAASGYGTQSVRLGKDAIKDFDCCSLSLQPCRDPVLTEDGYLYEKEAILQYILHQKTEIAKKMKAYEKQKQALKSEGQLESKSEERERAEKFKQRENNIVSKPINPFTSGKSKDEGNQNGSTSSSSTDTSSGESSSSSALPSFWIPSLTPEAKPTLLKKPSKTVSCPMSGRPLKMSDLITV 203          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_XENLA (Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23
Identity = 69/195 (35.38%), Postives = 96/195 (49.23%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAVPQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEA-PG*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EK+K     GYGTQ  RL KD++K FD CCL L+P  DP+    G+I+ KE ILE +L QKK+I R++ A+                  K  ++ AF  +    V +  +    +  +G   A         EE  + + +FW+PS TPEA    V+ P  +  CP     LK+K L PV
Sbjct:    3 RHGKNCTAGAVYTYYEKKKDTVASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDGYIYEKESILEYILHQKKEIARQMKAYEKQKNSKKAEMEELNKAAKESKMKAFLDKEMTIVSKPLNPFTRKSDSGIDAAEPSCSQQSSEEKNKQLPSFWIPSLTPEAKTSLVKKPDKTVYCPMSGRPLKMKDLMPV 197          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_XENTR (Nitric oxide synthase-interacting protein OS=Xenopus tropicalis GN=nosip PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23
Identity = 69/195 (35.38%), Postives = 97/195 (49.74%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAVPQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEA-PG*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EK+K     GYGTQ  RL KD++K FD CCL L+P  DP+    G+I+ KE ILE +L QKK+I R++ A+                  K  ++ AF  +    V +  +    +  +G   A         EE  + + +FW+PS TPEA    V+ P  +  CP   + LK+K L PV
Sbjct:    3 RHGKNCTAGAVYTYYEKKKDTAASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDGYIYEKEAILEYILHQKKEIARQMKAYDKQKNAKKAEMDELNKAAKESQMKAFLDKEMTIVSKPLNPFTRKSDSGADTAEPSGSQQSSEEKGKQLPSFWIPSLTPEAKTSLVKKPDKTVYCPMSGKPLKMKDLIPV 197          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_MACFA (Nitric oxide synthase-interacting protein OS=Macaca fascicularis GN=NOSIP PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19
Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELD---AFDQQNHGAVPQYNDRNHSQDKNGFHGANS---VKVTSYEEEALRTMKAFWLPSATPEAPG-*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E ILE +L QKK+I R++ A+             +  LQ+A   D    F ++    V +  +   ++  +G    N+     V    ++  + + +FW+PS TPEA    +E PS +  CP   + L++  L PV
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAY---EKQRGTRREEQKELQRAASQDHVRGFLEKESAIVSRPLNPFTAKALSGTSPDNAQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTPV 200          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_HUMAN (Nitric oxide synthase-interacting protein OS=Homo sapiens GN=NOSIP PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAVPQYNDRNH---SQDKNGFHGANSVKVTSYEE------------EALRTMKAFWLPSATPEAPG-*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E ILE +L QKK+I R++ A+                 ++ +EL     Q+H  V  + ++     S+  N F  A ++  TS ++            +  + + +FW+PS TPEA    +E PS +  CP   + L++  L PV
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRR---------EEQKELQRAASQDH--VRGFLEKESAIVSRPLNPF-TAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTPV 200          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_BOVIN (Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELD---AFDQQNHGAVPQYNDRNHSQDKNGFHGANSVKVTSYE----EEALRTMKAFWLPSATPEAPG-*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E ILE +L QKK+I R++ A+             +  LQ+A   D    F ++    V +  +    +  +  +G +  +  S      ++  + + +FW+PS TPEA    +E PS    CP   + L++  L PV
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAY---EKQRGARREEQKELQRAAAQDHVRGFLEKEAAIVSRPLNPFTPKAASAGNGPDDAQPGSSAGPAGKDKDKALPSFWIPSLTPEAKATKLEKPSRIVTCPMSGKPLRMSDLTPV 201          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_MOUSE (Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 61/200 (30.50%), Postives = 95/200 (47.50%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAV-----PQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEAPG-*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E ILE +L QK++I R++ A+                     ++  F ++    V     P         +  G     SV     +++  + + +FW+PS TPEA    +E PS +  CP   + L++  L  V
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKREIARQVKAYEKQRGARREEQKELQRAAAQDQVRGFLEKEAAIVSRPLNPFMPKAATLPNTEGEQPGPSVGPVGKDKD--KALPSFWIPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTSV 200          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_DROME (Nitric oxide synthase-interacting protein homolog OS=Drosophila melanogaster GN=CG6179 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17
Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAF-DQQNHGAVPQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTM--------KAFWLPSATPEAP-G*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH++N    A +TY+EK++     GYGT  +RLGKDS+K FD C L L+P   P+  + G++F KE IL+ ++++K +  R+L  +                 ++   ++ F + +     P ++    S+  +    A +    S    ++  M         +FWLPS  P A     + P A+  CP  ++ L++K L  V
Sbjct:    3 RHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRPVITKDGYLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLSQEANSKQQARMERFVNAEKPAMTPAHSSAAASEKPSTSSAAAAASSESSSASSISNMTNGHEKKLPSFWLPSECPNAGLAKAQKPDATIYCPVSQKPLRVKDLIDV 206          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_DICDI (Nitric oxide synthase-interacting protein homolog OS=Dictyostelium discoideum GN=nosip PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  109 RHSKNN--NDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRK 342
            RHSK++  N   F  Y E++ L YGT  ERLGKDSIK FD+C LCL   I P+ C KGH++CKECIL  L+ QKK I+ K
Sbjct:    3 RHSKHSCSNSGKFSNY-ERQLLKYGTTTERLGKDSIKNFDSCSLCLNDVIMPVICNKGHLYCKECILTSLIDQKKLIKIK 81          
BLAST of FC923540 vs. ExPASy Swiss-Prot
Match: NOSIP_CAEEL (Nitric oxide synthase-interacting protein homolog OS=Caenorhabditis elegans GN=R05G6.4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16
Identity = 65/212 (30.66%), Postives = 96/212 (45.28%), Query Frame = 1
Query:  109 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFCKECILECLLSQKKDIQRKLVAH----AAXXXXXXXXXXXRLMLQKARELDAFDQ--QNHGAVPQYNDRNHSQDKNGFHGANSV--KVTSYEEEAL---------RTMKAFWLPSATPEAPG-*VEAPSASTICPEGKEKLKLKSLFPV 678
            RH KN+   + +TY E+R+     GYGT   RLG DSIK F  C L L+P  +P+    G+IF +E ILE +L+QKK   +KL  +    A                 K  +  A +      GAV        S  + G   +  +  KV ++ EE +          ++ +FW+P   P A    +E PS+  +CP   + +KLK L  V
Sbjct:    3 RHGKNSTAASVYTYHERRRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISPTGYIFDREAILENILAQKKAYAKKLKEYEKQVAEESAAAKIAEGQAETFTKRTQFSAIESTPSRTGAVATPRPEVGSLKRQGGVMSTEIAAKVKAHGEEGVMSNMKGDKSTSLPSFWIPELNPTAVATKLEKPSSKVLCPVSGKPIKLKELLEV 214          
The following BLAST results are available for this feature:
BLAST of FC923540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NOSIP_DANRE6.273e-2433.83Nitric oxide synthase-interacting protein OS=Danio... [more]
NOSIP_XENLA1.397e-2335.38Nitric oxide synthase-interacting protein OS=Xenop... [more]
NOSIP_XENTR2.384e-2335.38Nitric oxide synthase-interacting protein OS=Xenop... [more]
NOSIP_MACFA1.224e-1932.84Nitric oxide synthase-interacting protein OS=Macac... [more]
NOSIP_HUMAN2.088e-1932.38Nitric oxide synthase-interacting protein OS=Homo ... [more]
NOSIP_BOVIN7.935e-1932.18Nitric oxide synthase-interacting protein OS=Bos t... [more]
NOSIP_MOUSE1.146e-1730.50Nitric oxide synthase-interacting protein OS=Mus m... [more]
NOSIP_DROME5.687e-1727.45Nitric oxide synthase-interacting protein homolog ... [more]
NOSIP_DICDI1.655e-1656.25Nitric oxide synthase-interacting protein homolog ... [more]
NOSIP_CAEEL6.287e-1630.66Nitric oxide synthase-interacting protein homolog ... [more]
back to top
Properties
Property NameValue
Genbank descriptionC31706C02EF StrClemenN Citrus clementina cDNA clone C31706C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923540 ID=FC923540; Name=FC923540; organism=Citrus clementina; type=EST; length=678bp
CTTTCGCTATTTCTAGGGTTTCACGTCTGTGGTCTAGAGCAATCAATTTG
GGTTTTTCTGTTTCTTTTTTTTTTCCCAATCAGACAACAAAATCAAACGA
TGCCGCAGAGGCACTCAAAGAACAATAACGATCTCGCCTTTTTCACGTAC
GATGAGAAGCGTAAGCTCGGATATGGCACGCAGAAGGAGCGGCTCGGTAA
GGACTCGATAAAGCCCTTTGATGCATGTTGCCTTTGTTTGAAGCCGTTCA
TCGATCCCTTGTGTTGCCAGAAAGGTCACATCTTCTGTAAAGAATGCATT
CTCGAGTGCCTTCTCTCCCAGAAAAAAGACATTCAAAGAAAGCTAGTTGC
CCATGCTGCTCAGCAGAAGCAGGAGAAGGAAGAGGAAGAAGAGAGGTTGA
TGTTGCAGAAAGCCAGGGAGCTTGATGCATTTGATCAGCAAAACCATGGT
GCTGTACCACAGTACAATGATAGAAATCATAGCCAAGACAAGAATGGCTT
CCATGGGGCAAATAGTGTGAAAGTCACATCTTACGAAGAGGAAGCCCTCC
GAACAATGAAAGCATTTTGGCTGCCTTCTGCTACCCCTGAGGCTCCTGGT
TAGGTTGAGGCCCCCTCCGCTAGCACAATATGTCCAGAAGGCAAGGAGAA
ACTGAAGCTGAAATCCCTCTTCCCTGTC
back to top