FC923541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.235e-30 Identity = 59/91 (64.84%), Postives = 67/91 (73.63%), Query Frame = 1 Query: 4 GTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWLAYKP 276 GTELDG +LED+I+V+YNKG LP FNNAAQAWNH+FFW I RDFGS+D F+KEFK+AAATQFGSGWAWLAYKP Sbjct: 44 GTELDGKTLEDIILVTYNKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAATQFGSGWAWLAYKP 134
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.449e-30 Identity = 59/91 (64.84%), Postives = 67/91 (73.63%), Query Frame = 1 Query: 1 VGTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWLAYK 273 VGTELDG SLE++I+ SYNKGD+LP FNNAAQ WNH+FFW IERDFGSF +FL EFK+AAATQFGSGWAWLAY+ Sbjct: 68 VGTELDGKSLEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWLAYR 158
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 111.694 bits (278), Expect = 1.195e-24 Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 1 VGTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWLAY 270 +GTEL+G LE +I +YN GD+LP FNNAAQAWNHEFFW +ERDF S+++F +EF +AAATQFG+GWAWLAY Sbjct: 52 LGTELEGKPLEHIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWLAY 141
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 4.864e-18 Identity = 43/87 (49.43%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 4 GTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWL 264 GTEL SLE+VI +++ FNNAAQ WNH FFW I +DFGSFD+ +EF +AAATQFGSGWAWL Sbjct: 46 GTELADKSLEEVIQIAFKDASKAGIFNNAAQVWNHTFFWNSLKPAGGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWL 132
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.297e-18 Identity = 43/87 (49.43%), Postives = 48/87 (55.17%), Query Frame = 1 Query: 4 GTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWL 264 GT+LD S+EDVI FNNAAQAWNH F+W I DFGSFD F++ FK A ATQFGSGWAWL Sbjct: 45 GTDLDNQSIEDVIKAVAGDASKAGIFNNAAQAWNHSFYWNCMKPGGGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSGWAWL 131
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.084e-17 Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 4 GTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWL 264 GT ++ +SLEDVI S+ + FNNAAQ WNH FFW I+ FGS D+F +EF +AAATQFGSGWAWL Sbjct: 46 GTPMESLSLEDVIKQSFGDSSKVGVFNNAAQVWNHTFFWNCLKAGGGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGSGWAWL 132
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.174e-17 Identity = 42/86 (48.84%), Postives = 47/86 (54.65%), Query Frame = 1 Query: 7 TELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWL 264 T+LDG +E VI FNNAAQAWNH F+W I DFGSF+ F+ EFK AAATQFGSGWAWL Sbjct: 46 TDLDGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWL 131
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.263e-14 Identity = 38/87 (43.68%), Postives = 48/87 (55.17%), Query Frame = 1 Query: 10 ELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWLAY 270 EL +LE++I S ++ + FNNAAQ WNH FFW I DFGSF+ F ++FK+ A QFGSGWAWL Y Sbjct: 59 ELQKKNLEEIIDWS-SQNQNIAIFNNAAQVWNHTFFWHSIKPNGGGKPSGKILKQINEDFGSFEEFCEQFKAEATGQFGSGWAWLVY 144
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.269e-14 Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 4 GTELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWL 264 GTE + M+LE++I+ + KG + FNNAAQ WNH F+W I + FGSF F ++F AAT FGSGWAWL Sbjct: 45 GTEFESMTLEEIIMKA--KGGI---FNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWL 126
BLAST of FC923541 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.240e-13 Identity = 38/87 (43.68%), Postives = 46/87 (52.87%), Query Frame = 1 Query: 10 ELDGMSLEDVIIVSYNKGDMLPPFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFDRFLKEFKSAAATQFGSGWAWLAY 270 EL LE++I S ++ FNNAAQ WNH FFW I +DFGSF+ F ++FK A QFGSGWAWL Y Sbjct: 59 ELQKKDLEEIIEWS-SQNSNAAIFNNAAQIWNHSFFWHSIKPQGGGKPSGKILEQINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVY 144 The following BLAST results are available for this feature:
BLAST of FC923541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923541 ID=FC923541; Name=FC923541; organism=Citrus clementina; type=EST; length=357bpback to top |