FC923550

Overview
NameFC923550
Unique NameFC923550
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14494 contig Ccv1_Contig14494:1..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.272e-78
Identity = 139/213 (65.26%), Postives = 166/213 (77.93%), Query Frame = 2
Query:   65 DEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAP-LLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPFY---YTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKVLERASGMRK 691
            +EVILLDFWPSMFGMR+RIALAEK ++YEYKEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CES I V+YI+EVWKDKAP LLPSD Y RAQARFW D+IDKK+YD   K W                    LEG LGDKP+FGG++FG++D++LI +Y   Y YETFG  S EAECPKF AW KRC+QRE++AK+LPD+ KVLE    +R+
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQ 216          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.834e-78
Identity = 138/213 (64.79%), Postives = 166/213 (77.93%), Query Frame = 2
Query:   65 DEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAP-LLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPFY---YTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKVLERASGMRK 691
            +EVILLDFWPSMFGMR+RIALAEK ++YEYK+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CES I V+YI+EVWKDKAP LLPSD Y RAQARFW D+IDKK+YD   K W                    LEG LGD+P+FGG++FG++D++LI FY   Y YETFG  S EAECPKF AW KRC+QRE++AK+LPD+ KVLE    +R+
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQ 216          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.234e-74
Identity = 130/205 (63.41%), Postives = 155/205 (75.61%), Query Frame = 2
Query:   59 MADEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPF---YYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKV 664
            M+DEV+LLD W SM+GMR RIALAEKGV YEYKEE+L N+SPLLLQMNP+HKKIPVLIHNG+P+CES+IIVQYIDEVW DK+PL+PSD Y+R+QARFWVD+IDKK+YD   K W                    LE  L DKPF+G D FG++DL LI F   +YTYET+G   +E ECPK  AWVKRC++RET++  LPD KKV
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.593e-65
Identity = 112/204 (54.90%), Postives = 148/204 (72.55%), Query Frame = 2
Query:   62 ADEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPF---YYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKV 664
            ++ V+LLDFWPS FGMR+RIALA KG++YE KEE+L +KSPLLL+MNPVHKKIP+LIHN + +CES  I++YIDEVW DK PLLPSD Y+R+QARFW D+IDKK+Y    + W                    LEG+LG+K +FGGDN G++D++L+PF   +Y+YET    SIEAECPK   W K C++ E+++K+LP   K+
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKI 206          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.545e-60
Identity = 108/206 (52.43%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   62 ADEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPF---YYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKVLE 670
            ++ V+LLDF  S FGMR+RIALA KG++YE KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P+CES  I++YIDEVW +K PLLPSD YQR+QARFW ++ID K+Y    + W                    LEG+LG+K +FGGDN G++D++L+PF   +Y+YET    SIEAEC K   W + C++ E ++K+LP   K+ +
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYD 207          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49
Identity = 97/221 (43.89%), Postives = 137/221 (61.99%), Query Frame = 2
Query:   68 EVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLP-------SDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFF---GGDNFGYLDLSLIPF---YYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKVLERASGMRK 691
            E++LLDFW S FG R RIA+AEKG+E+EY+EEDL NKS LLL+ NPVH+KIPVL+H GRPV ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD  ++ W                    LE +LGD+ FF   GG   G++D++L+PF   +Y+YE  G  S+E   P+  AW +RC + +++ K LP  +KV +    ++K
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKK 226          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.157e-49
Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 2
Query:   68 EVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLL-PSD------RYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFF---GGDNFGYLDLSLIPF---YYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKVLERASGMRK 691
            E++LLDFW S FG R RIA+AEKG+E+EY+EEDL NKS LLL+ NPVH+KIPVL+H GRPV ES +I+QY+D+ +     LL P++       Y RA ARFW D++D+K+YD  ++ W                    LE +LGD+ FF   GG   G++D++L+PF   +Y+YE  G  S+E   P+  AW +RC + +++AK LP  +KV +    ++K
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKK 226          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.280e-34
Identity = 86/205 (41.95%), Postives = 117/205 (57.07%), Query Frame = 2
Query:   68 EVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDL--SLIPFYYTY--ETFGKSSIEAE-CPKFKAWVKRCLQRETIAKALPDEKKVL 667
            EV LL FW S F  RV  AL  KGV+YEY EED  NKS LLLQ NPV+KK+PVLIHNG+P+ ES II++YIDE ++  + +LP D Y RA ARFW  F+D K+  A   T+                    L+ +L DK FF GD FG+ D+  +L+ F+     E +G   +++E  P F  W    +    + ++LP   ++L
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELL 205          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34
Identity = 83/214 (38.79%), Postives = 120/214 (56.07%), Query Frame = 2
Query:   65 DEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDAS-TKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDL---SLIPFYYT--YETFGKSSI-EAECPKFKAWVKRCLQRETIAKALPDEKKVLERASGM 685
            +EV LL  W S F  RV +AL  KG+ YEY EE L+NKSPLLL +NP+HKK+PVL+HNG+ + ES +I++YIDE W    P+LP D Y+R++ARF+   +D+++ +                           LE +L  K +FGG   G+LD    SLIPF     +E  G   I E + P+FK WV+   + E +   +P  ++ +E  + M
Sbjct:    5 EEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN-PILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYM 217          
BLAST of FC923550 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33
Identity = 76/157 (48.41%), Postives = 101/157 (64.33%), Query Frame = 2
Query:   65 DEVILLDFWPSMFGMRVRIALAEKGVEYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKT-WXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLI 532
            ++V LL    S F  RV+IAL  KGVEY++ EE+L NKS LLL+ NPVHKK+PV +HN +P+ ES +IV+YIDE WK+  P+LPSD YQRA ARFW  FID K+  A +K+ +                    LE +L DK FFGG+ FG +D++ +
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAV 161          
The following BLAST results are available for this feature:
BLAST of FC923550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
GSTX4_TOBAC1.272e-7865.26Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.834e-7864.79Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN4.234e-7463.41Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC3.593e-6554.90Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL4.545e-6052.43Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ2.764e-4943.89Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI6.157e-4944.34Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC3.280e-3441.95Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH4.284e-3438.79Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX6_SOYBN2.126e-3348.41Probable glutathione S-transferase OS=Glycine max ... [more]

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Properties
Property NameValue
Genbank descriptionC31706D03EF StrClemenN Citrus clementina cDNA clone C31706D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923550 ID=FC923550; Name=FC923550; organism=Citrus clementina; type=EST; length=717bp
GGTGTTTATCGTGTCTTTTCATTTATTCACTGTTGATTCTTAGTAAGCTT
CTGTAATAATGGCGGACGAAGTGATTCTGTTGGATTTCTGGCCCAGCATG
TTCGGGATGAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCGAGTATGA
ATACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGA
ACCCGGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGGTC
TGTGAGTCATCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGACAA
GGCTCCATTGCTTCCCTCTGATCGCTACCAGAGAGCTCAAGCTAGGTTCT
GGGTAGATTTCATTGACAAGAAGATGTATGATGCTTCGACGAAGACATGG
ACCACAGAGGGAGAAGAGCAGGAGGCGGCTAAGAAGGAGTTCTTTGAAGC
TCTGAAGACCTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGGAG
ACAATTTTGGGTATTTGGATTTGAGTTTGATCCCATTCTATTACACATAT
GAGACATTTGGAAAGTCCAGCATTGAGGCTGAGTGCCCCAAGTTCAAAGC
TTGGGTGAAGAGATGCTTGCAGAGGGAGACTATTGCCAAGGCACTTCCTG
ATGAGAAGAAAGTGCTTGAACGTGCTTCAGGCATGAGGAAAAATTAGTAT
TGGAGTAGAGAGAAAAG
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