FC923556

Overview
NameFC923556
Unique NameFC923556
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length760
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14497 contig Ccv1_Contig14497:1..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYA_RICCO (Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.432e-78
Identity = 152/231 (65.80%), Postives = 183/231 (79.22%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRS-IKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTRRTLP 690
            DW DI+FGIAEGVDFIA+SFV  A+ + HLK Y++ +S  S I V+AKIE+++SL+ LEEI+ ASDG MVARGDLG  IPLEQ+P+ Q+ I+ VCRQLNKPVIVASQLLESM+EYPTPTRAEVADVSEAVRQ ADALMLSGESA+G + +KA++VL+  S R+E W REE    A+     +G +  D I+E+ICN A  MANNLGVDA+FVYTK GHMASLLSR R   P
Sbjct:  284 DWLDIDFGIAEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSAQQNIVQVCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQYPEKALAVLRSVSVRIEKWWREEKHHEAM-ELPAIGSTYSDSISEEICNSAAKMANNLGVDALFVYTKDGHMASLLSRCRPDCP 513          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYA_TOBAC (Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.631e-74
Identity = 145/231 (62.77%), Postives = 180/231 (77.92%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRS-IKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTRRTLP 690
            DW DI+FGIAEGVDFIA+SFV  A+ ++HLK Y+  ++  S I V+AKIE+++SL+ LEEI++ASDG MVARGDLG  IPLEQ+P+ Q+ I+ +CRQLN+PVIVASQLLESM+EYP PTRAEVADVSEAVRQ  DALMLSGESA+G F +KA++VL+  S R+E   RE+ R   +     +  S  D I+E+ICN A  MANNL VDA+FVYTK+GHMASLLSR R   P
Sbjct:  294 DWLDIDFGIAEGVDFIAVSFVKSAEVIKHLKSYIQARARDSDISVIAKIESIDSLKNLEEIIQASDGAMVARGDLGAQIPLEQVPSEQQKIVQICRQLNRPVIVASQLLESMIEYPIPTRAEVADVSEAVRQRGDALMLSGESAMGQFPEKALTVLRSVSLRIERMWREQKRHEVI-ELPSIASSFSDSISEEICNSAAKMANNLEVDALFVYTKNGHMASLLSRCRPDCP 523          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYG_TOBAC (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.078e-45
Identity = 103/226 (45.58%), Postives = 144/226 (63.72%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTR 678
            DWDDI+FG+   VDF A+SFV DA  V  LK Y+   ++  I V+ KIE+ +S+  L  I+ ASDG MVARGDLG ++P+E++P +QE II  C+ + KPVIVA+ +LESM+++PTPTRAEV+D+S AVR+ ADA+MLSGE+A G +  KAV V+ + + R      E + Q +     Q   +    + E     +  MAN L    I V+T+ G MA +LS  R
Sbjct:  261 DWDDIKFGVNNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMIDHPTPTRAEVSDISIAVREGADAVMLSGETAHGKYPLKAVKVMHIVALR-----TESSLQKSTSSPSQ-SAAYKSHMGEMFAFHSSSMANTLST-PIIVFTRTGSMAIILSHNR 478          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYG_RICCO (Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.489e-43
Identity = 102/223 (45.74%), Postives = 138/223 (61.88%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLS 669
            DW DI+FG+   VDF A+SFV DA  V  LK+Y+  + +  I V+ KIE+ +S+  L  I+ ASDG MVARGDLG ++P+E++P +QE II  C  + KPVIVA+ +LESM+ +PTPTRAEV+D++ AVR+ ADA+MLSGE+A G +  KAV V+   + R E  S       A    +         + E     A  MAN L    I V+T+ G MA LLS
Sbjct:  118 DWGDIKFGVDNQVDFYAVSFVKDAKVVHELKEYLK-RCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKYPLKAVRVMHTVALRTESSSPVNTTPPAQGAYK-------GHMGEMFAFHATIMANTLNT-PIIVFTRTGSMAVLLS 331          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.668e-42
Identity = 96/230 (41.74%), Postives = 142/230 (61.74%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTRRTLP 690
            D +DI FGI +GVDFIA SFV     V  +++ +   ++  I+++ KIEN E +  ++ I+E SDG+MVARGDLGV+IP E++P VQ+ +I  C  L KPVI A+Q+L+SM   P PTRAE +DV+ A+    DA+MLSGE+A G +  +AV  +   +SR E     +   SA    +Q+  S+ D I + + + A+    NL V+AI   T+ GH A ++S+ R   P
Sbjct:  174 DANDIVFGIEQGVDFIAASFVRRPSDVLEIRELLEEHNAADIQIIPKIENQEGVDNIDAILEVSDGLMVARGDLGVEIPAEEVPLVQKELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGNYPVEAVQTMHNIASRSEEALNHKKILSA--RSKQVSMSITDAIGQSVAHTAI----NLDVNAIVTPTESGHTARMISKYRPQAP 397          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.105e-41
Identity = 93/229 (40.61%), Postives = 142/229 (62.01%), Query Frame = 1
Query:   10 DIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTRRTLPYL 696
            DI+FG+ + VDFIA SF+  AD V  +++ + G+  + I++++KIEN+E +    EI+E SDGIMVARGDLGV++ +E+I   Q++I+  C    KPVI A+Q+LESM++ P PTRAE  DV+ AV   +D +MLSGE+A G +  +AV ++       EL     + Q+ L    +L  +    IAE + + AV  A +L  D I   T+ G  A L+S+ R ++P +
Sbjct:  198 DIKFGVEQNVDFIAASFIRKADDVNEIRE-ILGEKGKDIQIISKIENVEGVDNFNEILEVSDGIMVARGDLGVEVQMEKIFVAQKMIVSKCNAAGKPVITATQMLESMIKNPRPTRAEATDVANAVLDGSDCVMLSGETASGDYPYEAVDIMAKICREAELVESSTDYQT-LFAALKLSSAKPVSIAETVASYAVATAIDLKADLIITLTETGLTARLVSKYRPSIPII 424          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.056e-41
Identity = 94/231 (40.69%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQR-QLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTRRTLP 690
            D  DI FGI +GVDFIA SF+  +  V  +++ +   +++ I+++ KIEN E +  ++ I+E SDG+MVARGDLGV+IP E++P VQ+ +I  C  L KPVI A+Q+L+SM   P PTRAE +DV+ A+    DA+MLSGE+A G +  +AV  +   +SR E      N +  L  +R Q+G ++ D I + + + A+    NL   AI   T+ GH A ++++ R   P
Sbjct:  174 DARDIVFGIEQGVDFIAPSFIRRSTDVLEIRELLEEHNAQDIQIIPKIENQEGVDNIDAILEVSDGLMVARGDLGVEIPAEEVPLVQKELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGSYPVEAVQTMHNIASRSE---EALNYKEILSKRRDQVGMTITDAIGQSVAHTAI----NLNAAAIVTPTESGHTARMIAKYRPQAP 397          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40
Identity = 95/227 (41.85%), Postives = 141/227 (62.11%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTR 678
            D DDI FGI+EGVDFIA SFV     V  ++K +  K +++I ++ KIEN E +  ++EI+E SDG+MVARGD+GV+IP E +P VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ R
Sbjct:  174 DADDINFGISEGVDFIAASFVRRPSDVLDIRKLLEAKQNKNISIIPKIENQEGIDNIKEILEVSDGLMVARGDMGVEIPPESVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGVSVAHTAL----NLNVKAIVAATESGSTARTISKYR 393          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYK_METEA (Pyruvate kinase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=pyk PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40
Identity = 99/226 (43.81%), Postives = 141/226 (62.39%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTR 678
            D  D+E G+A G D+IA+SFV   + V  +KK  +G++     V+AKIE  ++L +L+EI+E SDGIMVARGDLGV++PLEQ+P VQ+ I  V R+L KPV+VA+Q+LESM+  P PTRAEV+DV+ AV + ADA+MLS ESA G F  +A+  +   + ++E   R+    S L  QR   E      ++ I   A  +   L + +I  +T  G     L+R R
Sbjct:  175 DRGDLEAGLAAGADWIAVSFVQRPEDVAEVKKVAAGRAL----VMAKIEKPQALTRLDEIIEISDGIMVARGDLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVYEGADAVMLSAESAAGDFPVEAIGTMNRIAEQVE---RDALYWSILMAQRSEPE---PTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARAR 390          
BLAST of FC923556 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 92/232 (39.66%), Postives = 137/232 (59.05%), Query Frame = 1
Query:    1 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKLEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRTRRTLPYL 696
            D +DI FGI EGVDFIA SFV  A  V  ++  +   +  +++++ KIEN E +  ++EI+  SDG+MVARGDLGV+IP E++P VQ+ +I  C Q  KPVI A+Q+L+SM   P PTRAE +DV+ A+    DA+MLSGE+A G +  ++V  +     R+ L +       ++   R+     H  + E I   A   A NL V A+   T+ GH A ++++ R   P +
Sbjct:  174 DAEDILFGIREGVDFIAASFVRRASDVMEIRALLENNNGSNLQIIPKIENQEGVDNIDEILNVSDGLMVARGDLGVEIPPEEVPLVQKNLIEKCNQAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGIYPVESVQTM----DRIALTTEAAIDYRSVVSTRR--REKHGNMTEAIGQAAAYTAINLKVKAVLAPTESGHTAKMIAKYRPGCPVI 399          
The following BLAST results are available for this feature:
BLAST of FC923556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
KPYA_RICCO2.432e-7865.80Pyruvate kinase isozyme A, chloroplastic OS=Ricinu... [more]
KPYA_TOBAC1.631e-7462.77Pyruvate kinase isozyme A, chloroplastic OS=Nicoti... [more]
KPYG_TOBAC2.078e-4545.58Pyruvate kinase isozyme G, chloroplastic OS=Nicoti... [more]
KPYG_RICCO1.489e-4345.74Pyruvate kinase isozyme G, chloroplastic (Fragment... [more]
KPYK_BACLI3.668e-4241.74Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_DICDI3.105e-4140.61Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_BACSU4.056e-4140.69Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_STAS12.629e-4041.85Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_METEA2.629e-4043.81Pyruvate kinase OS=Methylobacterium extorquens (st... [more]
KPYK_BACPY5.856e-4039.66Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]

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Properties
Property NameValue
Genbank descriptionC31706D10EF StrClemenN Citrus clementina cDNA clone C31706D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923556 ID=FC923556; Name=FC923556; organism=Citrus clementina; type=EST; length=760bp
GATTGGGATGACATTGAGTTTGGAATTGCTGAAGGTGTCGATTTTATAGC
CATGTCATTTGTATGTGATGCTGATTCTGTCAGGCATTTGAAGAAATACG
TCTCTGGCAAATCATCTAGATCCATAAAAGTACTGGCAAAGATTGAAAAC
CTGGAGTCCCTTCAGAAATTGGAAGAAATTGTAGAGGCTTCTGATGGAAT
CATGGTGGCTCGAGGTGACCTTGGAGTTGATATTCCACTTGAACAGATTC
CAACAGTCCAAGAAATAATTATTCACGTGTGCAGGCAACTAAACAAGCCA
GTGATTGTAGCTTCTCAACTTCTTGAGTCAATGGTTGAATATCCAACTCC
AACACGTGCTGAGGTTGCAGATGTTTCTGAAGCAGTTAGACAATATGCAG
ATGCCTTGATGTTGTCTGGAGAATCTGCAATTGGACCATTTGGACAGAAG
GCTGTCTCTGTCCTGCAGATGGCCAGTAGTCGAATGGAACTATGGAGTCG
TGAGGAAAACCGACAAAGTGCTCTTTGTGGACAGCGTCAGTTAGGTGAAT
CACTGCATGATCGCATTGCTGAGCAGATCTGCAATTGCGCTGTTGATATG
GCTAACAACCTCGGAGTGGATGCCATTTTTGTCTATACTAAGCATGGCCA
TATGGCGTCTCTTCTGTCCCGCACCCGTCGAACCCTCCCATATTTGCATT
CACAATGATGACAGCACCCGGATGGCTCTGAACTTGCATGGGGGGGTATC
CCGTACTAGT
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