FC923562

Overview
NameFC923562
Unique NameFC923562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7891 contig Ccv1_Contig7891:877..1567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF3_ARATH (6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 5.559e-100
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 1
Query:    1 RAINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIRSATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPINLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            RAINAAHVEAES EN IG+VKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEG GGLFEYIE RLKE+GHMV+VIAEGAGQDL+++S+ S T +DASGNKLL+DVGLWLSQ IKDHF  +KKM +NLKYIDPTYMIRAVPSNASDNVYCTLLAQS VHGAMAGYTGY SGLVNGRQTYIPFYRI EKQ+HVVITDRMWARLLSST
Sbjct:  241 RAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGEGGLFEYIEKRLKESGHMVLVIAEGAGQDLMSKSMESMTLKDASGNKLLKDVGLWLSQSIKDHF-NQKKMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYISGLVNGRQTYIPFYRITEKQNHVVITDRMWARLLSST 446          
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF7_ARATH (6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 9.813e-97
Identity = 177/207 (85.51%), Postives = 191/207 (92.27%), Query Frame = 1
Query:    1 RAINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIRSATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPINLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            RAINAAHVEAES+EN IG VKLMGRYSG+IAMYATLASRDVDCCLIPESPFYLEG GGLFE+IE RLK++GHMVIV+AEGAGQDL+ +S+ S T  DASGNKLL+DVGLWLSQ IKDHF K+ KM +NLKYIDPTYMIRAVPSNASDNVYCTLLAQS VHGAMAGYTGYTSGLVNGRQTYIPFYRI E Q++VVITDRMWARLLSST
Sbjct:  241 RAINAAHVEAESNENGIGFVKLMGRYSGYIAMYATLASRDVDCCLIPESPFYLEGEGGLFEFIERRLKDHGHMVIVLAEGAGQDLMCKSMES-TPMDASGNKLLKDVGLWLSQSIKDHF-KKNKMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYTSGLVNGRQTYIPFYRITETQNNVVITDRMWARLLSST 445          
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF1_ARATH (6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.501e-92
Identity = 172/208 (82.69%), Postives = 187/208 (89.90%), Query Frame = 1
Query:    1 RAINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIR-SATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPINLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            RAINAAHVEA S EN IGLVKLMGRYSGFIAM+ATLASRDVDCCLIPESPF+LEG GGLFE+I+ RLKE+GHMVIVIAEGAGQDLL+ES++ S T +DASGNKLLQD+GLW+SQ+IKDHFA  KKM + LKYIDPTYMIRAVPSNASDNV CTLLAQS VHG MAGY G+T GLVNGR TYIPF RI EKQ+ VVITDRMWARLLSST
Sbjct:  242 RAINAAHVEATSFENGIGLVKLMGRYSGFIAMHATLASRDVDCCLIPESPFFLEGSGGLFEFIDKRLKESGHMVIVIAEGAGQDLLSESMKESTTLKDASGNKLLQDIGLWISQRIKDHFA--KKMTLTLKYIDPTYMIRAVPSNASDNVCCTLLAQSAVHGVMAGYNGFTVGLVNGRHTYIPFNRITEKQNKVVITDRMWARLLSST 447          
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF6_ARATH (6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 9.505e-92
Identity = 169/207 (81.64%), Postives = 184/207 (88.89%), Query Frame = 1
Query:    1 RAINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIRSATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPINLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            RAINAAHVEA S EN IG+VKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEG GGL+E+I  RL+ENGHMVIVIAEGAGQDL+AESI    QQDASGNKLL+DVGLW+S KIK++FAK   M I LKYIDPTYMIRA+P+NASDNVY TLLAQS VHGAMAGYTG+ SGLVNGR TYIPF RI E+Q+ VVITDRMWAR+LSST
Sbjct:  242 RAINAAHVEATSVENGIGIVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLYEFIAKRLRENGHMVIVIAEGAGQDLVAESIE---QQDASGNKLLKDVGLWMSLKIKEYFAKHNVMDITLKYIDPTYMIRAIPANASDNVYSTLLAQSAVHGAMAGYTGFVSGLVNGRHTYIPFNRITERQNKVVITDRMWARMLSST 445          
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF4_ARATH (6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.570e-86
Identity = 155/207 (74.88%), Postives = 179/207 (86.47%), Query Frame = 1
Query:    1 RAINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIRSATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPINLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            RAINAAHVE ES EN +G+VKLMGRYSGFIAM ATLA+RDVDCCLIPESPF+LEG GGLFE+IE RLKEN HMVIVIAEGAGQD +A+S+R++  +DASGN+LL DVGLWL+Q+IKDHF   +KM IN+KYIDPTYMIRA+PSNASDNVYCTLLAQS VHGAMAGY+G+T G VN R  YIP  ++ E  + V +TDRMWARLL+ST
Sbjct:  292 RAINAAHVEVESVENGVGIVKLMGRYSGFIAMIATLANRDVDCCLIPESPFFLEGKGGLFEFIEERLKENRHMVIVIAEGAGQDYVAQSMRASETKDASGNRLLLDVGLWLTQQIKDHFTNVRKMMINMKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYSGFTVGPVNSRHAYIPISQVTEVTNTVKLTDRMWARLLAST 498          
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF2_ARATH (6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.065e-62
Identity = 116/207 (56.04%), Postives = 150/207 (72.46%), Query Frame = 1
Query:    4 AINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIRSATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPI-NLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            AI+AAHVEAES+ N IGLVKLMGR +G IA++ATL+SRDVDCCLIPE  FYLEG GGLFE++E RLKE GH V+V+AEGAGQ+++  +     ++D SGN +  DVG+W    +K  + +E    +  +KYIDPTYMIRAVP+NA+DN+YCTLLA S +HG MAGYTG+  G +NG   YIP   + + ++ V   D  WA + S T
Sbjct:  227 AISAAHVEAESAVNGIGLVKLMGRSTGHIALHATLSSRDVDCCLIPEMDFYLEGKGGLFEFLEKRLKERGHAVLVVAEGAGQEMIPRNESQKQERDESGNAVFLDVGVWFKSVLKAWWEREHPDELFTVKYIDPTYMIRAVPANATDNLYCTLLAHSAIHGVMAGYTGFVPGPINGNYAYIPLEEVAQTKNQVNTRDHKWAWVRSVT 433          
BLAST of FC923562 vs. ExPASy Swiss-Prot
Match: K6PF5_ARATH (6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.772e-51
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 1
Query:    1 RAINAAHVEAESSENCIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGHGGLFEYIETRLKENGHMVIVIAEGAGQDLLAESIRSATQQDASGNKLLQDVGLWLSQKIKDHFAKEKKMPINLKYIDPTYMIRAVPSNASDNVYCTLLAQSCVHGAMAGYTGYTSGLVNGRQTYIPFYRIIEKQHHVVITDRMWARLLSST 621
            RAIN+A++EA S+ + IG+VKLMGR SGFIAM A+LAS  VD CLIPE PF L G  G+ ++++  ++  G  VI +AEGAGQ+ L ++      +DASGN +L D G+++ Q+ K +F KE   PI++KYIDPTYMIRAV +NASD + CT+L Q+ VHGA AGY+G T G++N    Y+P   +I     V    RMW R L+ST
Sbjct:  330 RAINSAYIEAHSAYHGIGVVKLMGRNSGFIAMQASLASGQVDICLIPEVPFNLHGPNGVLKHLKYLIETKGSAVICVAEGAGQNFLEKT----NAKDASGNAVLGDFGVYIQQETKKYF-KEISTPIDVKYIDPTYMIRAVRANASDGILCTVLGQNAVHGAFAGYSGITVGIINTHYAYLPITEVIAYPKSVDPNSRMWHRCLTST 531          
The following BLAST results are available for this feature:
BLAST of FC923562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
K6PF3_ARATH5.559e-10087.446-phosphofructokinase 3 OS=Arabidopsis thaliana GN... [more]
K6PF7_ARATH9.813e-9785.516-phosphofructokinase 7 OS=Arabidopsis thaliana GN... [more]
K6PF1_ARATH2.501e-9282.696-phosphofructokinase 1 OS=Arabidopsis thaliana GN... [more]
K6PF6_ARATH9.505e-9281.646-phosphofructokinase 6 OS=Arabidopsis thaliana GN... [more]
K6PF4_ARATH1.570e-8674.886-phosphofructokinase 4, chloroplastic OS=Arabidop... [more]
K6PF2_ARATH2.065e-6256.046-phosphofructokinase 2 OS=Arabidopsis thaliana GN... [more]
K6PF5_ARATH4.772e-5150.726-phosphofructokinase 5, chloroplastic OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionC31706E06EF StrClemenN Citrus clementina cDNA clone C31706E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923562 ID=FC923562; Name=FC923562; organism=Citrus clementina; type=EST; length=691bp
CGTGCTATTAATGCAGCGCATGTTGAAGCCGAAAGTAGTGAGAATTGTAT
TGGACTTGTGAAGCTGATGGGCCGCTATAGTGGGTTTATTGCAATGTATG
CTACTCTTGCTAGCCGAGATGTGGACTGTTGTTTAATCCCGGAGTCGCCC
TTTTATCTCGAAGGGCATGGTGGACTTTTTGAATATATTGAGACGCGACT
GAAAGAAAATGGGCACATGGTTATTGTGATAGCTGAAGGTGCTGGACAGG
ACTTGCTTGCTGAGAGCATTCGGTCAGCAACCCAGCAGGATGCTTCAGGA
AACAAGCTCCTCCAAGATGTTGGGCTGTGGTTATCACAGAAGATCAAGGA
TCATTTTGCAAAAGAAAAGAAGATGCCCATCAACCTTAAATATATAGATC
CTACATACATGATCCGTGCTGTTCCAAGCAATGCATCCGATAATGTGTAC
TGCACGCTTCTTGCTCAAAGTTGTGTACATGGAGCAATGGCTGGGTACAC
TGGTTATACATCCGGTCTTGTCAATGGCAGACAAACTTACATACCCTTCT
ATCGAATAATTGAGAAACAGCACCATGTTGTGATTACCGATAGGATGTGG
GCGAGGCTCCTGTCTTCAACAATCAGCCAAGCTTTATGAACCCTAAGATG
TCATTGAAGACAAGAAGAGGAAGACTACTACCCAGATTGTC
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