FC923583

Overview
NameFC923583
Unique NameFC923583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14501 contig Ccv1_Contig14501:1..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: AGUB_SOLTU (N-carbamoylputrescine amidase OS=Solanum tuberosum GN=CPA PE=2 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 6.123e-116
Identity = 205/244 (84.02%), Postives = 219/244 (89.75%), Query Frame = 2
Query:    5 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEILRHSTERVNHILRELLY---CXPNGEML 727
            V V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E FF RAKPY  HPTI++MQ LAKELGVVIPV+FFEEANNAHYNS+AIIDADG+DLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTK+AKIGVAICWDQWFPEAARAM LQGAE+LFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEI+   TE  N  +    Y     P GE++
Sbjct:    8 VTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFFHRAKPYLGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKYAKIGVAICWDQWFPEAARAMALQGAEVLFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEII--ETEHGNSEITFYGYSFIAGPTGELV 249          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: AGUB_SOLLC (N-carbamoylputrescine amidase OS=Solanum lycopersicum GN=CPA PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 1.044e-115
Identity = 204/244 (83.61%), Postives = 219/244 (89.75%), Query Frame = 2
Query:    5 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEILRHSTERVNHILRELLY---CXPNGEML 727
            V V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E FF RAKPY  HPTI++MQ LAKELGVVIPV+FFEEANNAHYNS+AIIDADG+DLGLYRKSHIPDGPGYQEK+YFNPGDTGFKVFQTK+AKIGVAICWDQWFPEAARAM LQGAE+LFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEI+   TE  N  +    Y     P GE++
Sbjct:    8 VTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFFHRAKPYPGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKYYFNPGDTGFKVFQTKYAKIGVAICWDQWFPEAARAMALQGAEVLFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEII--ETEHGNSEITFYGYSFIAGPTGELV 249          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: AGUB_ARATH (N-carbamoylputrescine amidase OS=Arabidopsis thaliana GN=CPA PE=1 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.087e-113
Identity = 199/245 (81.22%), Postives = 211/245 (86.12%), Query Frame = 2
Query:    2 EVVVSALQFACTDDVSTNLATAER---------------------------LVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIL 655
            EVVVS+LQFAC+DD+STN+A AER                           LVR AH KGANIILIQELFEGYYFCQAQRE FF+RAKPYK+HPTI +MQ+LAKELGVVIPV+FFEEAN AHYNSIAIIDADG+DLG+YRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQD GLDSRDHWRRVMQGHAGANVVPLVASNRIGKEI+
Sbjct:    9 EVVVSSLQFACSDDISTNVAAAERFVSLSSSLPLSNYQSLPSSSSFKFPYALVREAHAKGANIILIQELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIPVSFFEEANTAHYNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDQGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEII 253          

HSP 2 Score: 28.8758 bits (63), Expect = 1.087e-113
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  678 ITFYGNSFIAXPTG 719
            ITFYG SFIA PTG
Sbjct:  262 ITFYGTSFIAGPTG 275          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: AGUB_ORYSJ (N-carbamoylputrescine amidase OS=Oryza sativa subsp. japonica GN=CPA PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.198e-103
Identity = 182/246 (73.98%), Postives = 208/246 (84.55%), Query Frame = 2
Query:    2 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIL--RHSTERVNHILRELLYCXPNGEMLLL 733
            +V V+A+QFACTD  S N+ TAERL+R AH KGANI+L+QELFEG YFCQAQR  FFQRAKPYK +PTI++ Q+LAKEL VVIPV+FFEEANNAHYNS+AIIDADG+DLGLYRKSHIPDGPGYQEKFYFNPGDTGFK F+TK+A IGV ICWDQWFPE ARAMVLQGAEILFYPTAIGSEPQD+ LDSR+HW+RVMQGHAGAN+VPLVASNRIG+E +   H    +       +   P GE++ L
Sbjct:   10 KVSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFI-AGPTGEIVKL 254          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: YCU9_SCHPO (Probable nitrilase C965.09 OS=Schizosaccharomyces pombe GN=SPCC965.09 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.701e-20
Identity = 72/208 (34.62%), Postives = 97/208 (46.63%), Query Frame = 2
Query:   41 DVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNF---FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 649
            DV  NL      V          N+IL  EL    Y C      F Q A+   + P+   M  LA +  V I   F    E+ +N  YNS   I  +G+  G+YRK H+ D     E+ +F  G + F +F+T F K+GV ICWD  FPE AR   L GA++L   T   +   DD       W  V +  A  N +PLVA+NR+G +
Sbjct:   16 DVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECG---NTFTQIAEIAGEGPSFKTMSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHLFD----TERKHFKKG-SDFPIFETSFGKLGVMICWDTAFPEVARIHALNGADLLVVATNWENPYSDD-------WDLVTKARAFENCIPLVAANRVGTD 208          

HSP 2 Score: 22.7126 bits (47), Expect = 4.701e-20
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  672 ESITFYGNSFIAXPTGR 722
            E ++F+G+S I  PTG+
Sbjct:  209 EKLSFFGHSKIIGPTGK 225          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: DCAS_AGRSK (N-carbamoyl-D-amino acid hydrolase OS=Agrobacterium sp. (strain KNK712) PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17
Identity = 72/223 (32.29%), Postives = 107/223 (47.98%), Query Frame = 2
Query:   74 LVRAAHGKGANIILIQEL-----FEGYYFC-QAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNF----FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ--------EKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILF----YPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE----ILRHS 664
            ++  A  +GAN I+  EL     F  ++F  +A+ + F++   P    P +  + E A ELG+   + +     E      +N+  ++D  G  +G YRK H+P    Y+        EK YF PGD GF V+    AK+G+ IC D+ +PEA R M L+GAEI+      PT     PQ D L S  H    MQ  +  N     A+ ++G E    +L HS
Sbjct:   31 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMP---GPVVRPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFICNDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLS-MQAGSYQNGAWSAAAGKVGMEENCMLLGHS 249          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: BUP1_PONAB (Beta-ureidopropionase OS=Pongo abelii GN=UPB1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.599e-16
Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 2
Query:   38 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 649
            + VS      + +V  A   G NII  QE +   + FC  ++  + + A+  +D PT    Q+LAK   +V+     E   E  +  +N+  +I   G+ LG  RK+HIP    + E  Y+  G+ G  VFQT+F +I V IC+ +  P       + GAEI+F P+A        G  S   W    +  A AN     A NR+G E
Sbjct:   91 EQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSA------TIGALSESLWSIEARNAAIANHCFTCAINRVGTE 292          

HSP 2 Score: 21.9422 bits (45), Expect = 1.599e-16
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  684 FYGNSFIAXPTG 719
            FYG+S++A P G
Sbjct:  313 FYGSSYVAAPDG 324          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: DCAS_RHIRD (N-carbamoyl-D-amino acid hydrolase OS=Rhizobium radiobacter PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.476e-16
Identity = 70/219 (31.96%), Postives = 103/219 (47.03%), Query Frame = 2
Query:   86 AHGKGANIILIQEL-----FEGYYFC-QAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNF----FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ--------EKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILF----YPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE----ILRHS 664
            A  +G N I+  EL     F  ++F  +A+ + F++   P    P +  + E A ELG+   + +     E      +N+  ++D  G  +G YRK H+P    Y+        EK YF PGD GF V+    AK+G+ IC D+ +PE  R M L+GAEI+      PT     PQ D L S  H    MQ  +  N     A+ ++G E    +L HS
Sbjct:   35 AASRGVNFIVFPELALTTFFPRWHFTDEAELDSFYETEMP---GPVVRPLFETAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFICNDRRWPETWRVMGLKGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLS-MQAGSYQNGAWSAAAGKVGMEEGCMLLGHS 249          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: NIT2B_XENLA (Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16
Identity = 67/208 (32.21%), Postives = 102/208 (49.04%), Query Frame = 2
Query:   11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVNFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVV 616
            +S +QF  +   S NL  A +L++ A  KGA I+ + E F   Y      + F + A+      T L + ++AKE G+ +I  +  EE +   YN+ A+   DG+ L  +RK H+   D PG   +QE    +PGD+ F VF T + K+GV IC+D  F E A+    +G ++L YP A              HW  + +  A  N V
Sbjct:    6 LSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPY----GTKYFPEYAEKIPGESTEL-LSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDS-FSVFDTPYCKVGVGICYDMRFAELAQIYANKGCQLLVYPGAFNM------TTGPAHWELLQRARALDNQV 201          
BLAST of FC923583 vs. ExPASy Swiss-Prot
Match: BUP1_HUMAN (Beta-ureidopropionase OS=Homo sapiens GN=UPB1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 2
Query:   38 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVNFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 649
            + VS      + +V  A   G NII  QE +   + FC  ++  + + A+  +D PT    Q+LAK   +V+     E   E  +  +N+  +I   G+ LG  RK+HIP    + E  Y+  G+ G  VFQT+F +I V IC+ +  P       + GAEI+F P+A        G  S   W    +  A AN     A NR+G E
Sbjct:   91 EQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSA------TIGALSESLWPIEARNAAIANHCFTCAINRVGTE 292          
The following BLAST results are available for this feature:
BLAST of FC923583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
AGUB_SOLTU6.123e-11684.02N-carbamoylputrescine amidase OS=Solanum tuberosum... [more]
AGUB_SOLLC1.044e-11583.61N-carbamoylputrescine amidase OS=Solanum lycopersi... [more]
AGUB_ARATH1.087e-11381.22N-carbamoylputrescine amidase OS=Arabidopsis thali... [more]
AGUB_ORYSJ1.198e-10373.98N-carbamoylputrescine amidase OS=Oryza sativa subs... [more]
YCU9_SCHPO4.701e-2034.62Probable nitrilase C965.09 OS=Schizosaccharomyces ... [more]
DCAS_AGRSK2.924e-1732.29N-carbamoyl-D-amino acid hydrolase OS=Agrobacteriu... [more]
BUP1_PONAB1.599e-1631.25Beta-ureidopropionase OS=Pongo abelii GN=UPB1 PE=2... [more]
DCAS_RHIRD2.476e-1631.96N-carbamoyl-D-amino acid hydrolase OS=Rhizobium ra... [more]
NIT2B_XENLA3.233e-1632.21Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE... [more]
BUP1_HUMAN1.229e-1531.25Beta-ureidopropionase OS=Homo sapiens GN=UPB1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC31706G06EF StrClemenN Citrus clementina cDNA clone C31706G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923583 ID=FC923583; Name=FC923583; organism=Citrus clementina; type=EST; length=735bp
GGAAGTGGTGGTGTCAGCTCTGCAATTCGCTTGCACCGACGATGTCTCTA
CTAATCTTGCCACCGCTGAAAGGCTGGTCAGAGCTGCTCATGGAAAAGGT
GCAAACATAATTCTTATTCAGGAACTCTTTGAGGGTTATTATTTCTGTCA
AGCACAAAGAGAGGTCTTCTTTCAGCGTGCTAAGCCATATAAGGACCATC
CCACAATTCTCAAGATGCAGGAGCTTGCGAAAGAGCTAGGTGTAGTGATA
CCAGTTAACTTCTTTGAAGAGGCCAATAATGCCCATTACAATTCAATAGC
GATCATTGATGCTGATGGATCTGATCTTGGACTCTACAGGAAGTCCCATA
TCCCAGATGGACCAGGCTATCAGGAAAAGTTCTACTTCAATCCAGGGGAC
ACTGGCTTCAAGGTTTTCCAAACTAAATTTGCAAAAATTGGAGTTGCAAT
ATGCTGGGATCAGTGGTTTCCAGAGGCAGCTCGGGCTATGGTTTTACAAG
GTGCTGAGATATTGTTTTACCCTACTGCTATTGGTTCTGAACCTCAAGAT
GATGGACTTGATTCTCGTGATCACTGGAGGCGAGTGATGCAAGGGCATGC
TGGGGCTAATGTAGTACCTCTAGTTGCTTCGAATCGCATTGGAAAAGAAA
TATTGAGACACAGCACGGAAAGAGTCAATCACATTCTACGGGAACTCCTT
TATTGCANGCCCAACGGGGAGATGTTGCTGCTGCT
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