FC923585
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PMP22_ARATH (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.664e-48 Identity = 87/174 (50.00%), Postives = 117/174 (67.24%), Query Frame = 3 Query: 135 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVXXXXXXXXXXXMFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEGRSWSLVKNKVRKDYPSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFLNLKARS 656 K ++YL QLQ HPLRTKAITAG+L+G SD ++QK+SG+ + + + GP GHF H +D F V+LEQLT SP N+ LFM+YYG+V+E W+LV+ +++K YP+VQLTAW F+P+VGW+NY+Y+PL FRV+ HS VA W IFL L+ARS Sbjct: 8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARS 181
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PXMP2_MOUSE (Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14 Identity = 50/180 (27.78%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 120 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS-----GVXXXXXXXXXXXMFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGL-VVEGRSWSLVKNKVRKDY-PSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFL 638 + + K A +YL+ L+++P+ TKA+++GIL+ + +AQ I + YG GP H+L+ M+ +LL++L +P FL + ++ + ++EG++ S+ K+R + P++Q+ WR W + ++N Y+PLQFRV+F + A W +L Sbjct: 14 LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASVKR-LLLDRLFFAP--TFLLLFFFVMNLLEGKNVSVFVAKMRSGFWPALQMN-WRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PXMP2_RAT (Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 50/180 (27.78%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 120 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS-----GVXXXXXXXXXXXMFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGL-VVEGRSWSLVKNKVRKDY-PSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFL 638 + + K A +YL+ L+ +P+ TKA+++GIL+ + +AQ I + YG GP H+L+ M+ + +LL++L +P FL + ++ + ++EG++ S+ K+R + P++Q+ WR W + ++N Y+PLQFRV+F + A W +L Sbjct: 14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTGPLSHYLYLFMEY-WVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNLLEGKNISVFVAKMRSGFWPALQMN-WRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PXMP2_BOVIN (Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 51/183 (27.87%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 111 QPAMSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVXXXXXXXXXXXM-------FYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEGRSWSLVKNKVRKDYPSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFL 638 + + + + A +YL L+++P+ TKA T+GIL+ + +AQ I + YGF + GP GHF + LM+ + +LL++L +P LF + + EG+ + K++ + WR W V ++N YIP+QFRV+F + VA W +L Sbjct: 11 EAGLGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGFFFTGPLGHFFYLLMER-WIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFL-EGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYL 191
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PX24C_DICDI (PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13 Identity = 40/166 (24.10%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 153 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVXXXXXXXXXXXMFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEGRSWSLVKNKVRKDYPSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFLNLKA 650 Y+ +L+ P++TKA+T+ L+ S +AQK +G P H+ H ++D +F ++++QL +P+ N F +++G+ S++ +P+++ +W+ WP+ +N++++P RV+F + V CW I+L++ A Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLI-SSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKPKSILFKLYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILA 179
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.365e-12 Identity = 52/172 (30.23%), Postives = 79/172 (45.93%), Query Frame = 3 Query: 135 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVXXXXXXXXXXXMF----YGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEGRSWSLVKNKVRKDYPSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFL 638 K A YL QL +P+ TKA+T+G L SD++ Q I +GFA GP H+ K +D F + ++Q+ SP NFLF G ++EG+S + K++KD+ + ++ WP + +VN+ YI RV F + W FL Sbjct: 9 KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIK-LTIDQVVCSPVFNFLFFSGMG-ILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 48/182 (26.37%), Postives = 83/182 (45.60%), Query Frame = 3 Query: 111 QPAMSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS------GVXXXXXXXXXXXMFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEGRSWSLVKNKVRKDYPSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFL 638 + + + + A +YL+ L+++P+ TKA T+GIL+ + +AQ I YGF + GP HF + M+ + +LL++L +P LF + + EG+ S K+R + WR W + ++N Y+PL+FRV+F + A W +L Sbjct: 11 EAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEH-WIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFL-EGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190
BLAST of FC923585 vs. ExPASy Swiss-Prot
Match: MPV17_XENLA (Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 49/172 (28.49%), Postives = 77/172 (44.77%), Query Frame = 3 Query: 144 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVXXXXXXXXXXXMFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEGRSWSLVKNKVRKDYPSVQLTAWRFWPIVGWVNYQYIPLQFRVVFHSFVASCWAIFLNLKA 650 WR Y L HP + + +TAG L G D I+Q++ G+ M GF + GP +K++D I +LL+Q+ +P F+ + G S + K+++DY +T + WP V N+ +IPL R+ FVA W +L+ KA Sbjct: 5 WRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVGPVVGGWYKILDRIIPGSGKPVALKK-MLLDQVAFAPCFLGCFLSIAS-ALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSYLSWKA 174 The following BLAST results are available for this feature:
BLAST of FC923585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923585 ID=FC923585; Name=FC923585; organism=Citrus clementina; type=EST; length=656bpback to top |