FC923591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.289e-40 Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLY TNSLFSAWD QFYPE+ EKGSH++QIDV++EKGG+ INP FFVDF EPDGP+LAHEMRYPGGDCTSDIWI Sbjct: 403 GGPQMIQLSLDGKRLYATNSLFSAWDRQFYPEIMEKGSHIIQIDVDTEKGGLTINPDFFVDFGDEPDGPSLAHEMRYPGGDCTSDIWI 490
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.782e-35 Identity = 65/88 (73.86%), Postives = 77/88 (87.50%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLYVTNSL+S WD QFYP++ ++GS MLQIDV++EKGG+ +NP F VDF EP GP LAHE+RYPGGDC+SDIW+ Sbjct: 385 GGPQMIQLSLDGKRLYVTNSLYSKWDKQFYPDMIKEGSVMLQIDVDTEKGGLKLNPNFLVDFGKEPGGPVLAHELRYPGGDCSSDIWV 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.782e-35 Identity = 65/88 (73.86%), Postives = 78/88 (88.64%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKR+YVT+SL+S WD QFYP+L ++G+ MLQIDV+++KGG+ +NP F VDF EPDGP LAHE+RYPGGDCTSDIWI Sbjct: 385 GGPQMIQLSLDGKRIYVTSSLYSIWDKQFYPDLLKEGAVMLQIDVDTKKGGLKLNPNFLVDFGKEPDGPVLAHEIRYPGGDCTSDIWI 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.426e-35 Identity = 63/88 (71.59%), Postives = 78/88 (88.64%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKR+YVT+S++S WD QFYP++ ++G+ MLQIDV++EKGG+ +NP F VDF EPDGP LAHE+RYPGGDC+SDIWI Sbjct: 385 GGPQMIQLSLDGKRIYVTSSIYSIWDKQFYPDMLKEGAVMLQIDVDTEKGGLKLNPNFLVDFGKEPDGPVLAHELRYPGGDCSSDIWI 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.877e-34 Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLYVT SL+SAWD QFYP+L +GS MLQ+DV++ KGG+ +NP F VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 385 GGPQMIQLSLDGKRLYVTTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.452e-34 Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLY+T SL+SAWD QFYP+L +GS MLQ+DV++ KGG+ +NP F VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 385 GGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 7.133e-34 Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLYVT SL+SAWD QFYP L +GS MLQIDV++ GG+ +NP F VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 385 GGPQMIQLSLDGKRLYVTTSLYSAWDKQFYPNLIREGSVMLQIDVDTANGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.217e-33 Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLY T SL+SAWD QFYP+L +GS MLQIDV++ GG+ +NP F VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 385 GGPQMIQLSLDGKRLYATTSLYSAWDKQFYPDLIREGSMMLQIDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.710e-33 Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDG RLYVT SL+SAWD QFYP+L +GS MLQIDV++ +GG+ +NP F VDF EP GPALAHE+RYPGGDC+SDIW+ Sbjct: 385 GGPQMIQLSLDGTRLYVTTSLYSAWDKQFYPDLIREGSVMLQIDVDTVRGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWL 472
BLAST of FC923591 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.030e-32 Identity = 63/88 (71.59%), Postives = 73/88 (82.95%), Query Frame = 1 Query: 1 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPKFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 264 GGPQMIQLSLDGKRLY T SL+S WD QFYP+L +GS MLQ+DV++ GG+ +NP F VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 385 GGPQMIQLSLDGKRLYATTSLYSDWDKQFYPDLIREGSVMLQVDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472 The following BLAST results are available for this feature:
BLAST of FC923591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923591 ID=FC923591; Name=FC923591; organism=Citrus clementina; type=EST; length=483bpback to top |