FC923597

Overview
NameFC923597
Unique NameFC923597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11742 contig Ccv1_Contig11742:565..1250. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_AQUAE (Cell division protein ftsY homolog OS=Aquifex aeolicus GN=ftsY PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.691e-51
Identity = 98/186 (52.69%), Postives = 138/186 (74.19%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            T++GKLA++LK +G K L+ AGDTFRAAA +QLE+WA+R G +IV  E E +   +V+ + +K+ KE+G+++VL DT+GRLHT   L+ EL   KK + K     P+E  LV+D TTG N + QA+ F + V ITG+++TKLDGSA+GG VV++  EL IP+K VGVGEG++DLQPFDA+A+V A+
Sbjct:  275 TTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIVKKE-EGSDPGAVVYEGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATTGQNAIQQAKVFKEAVDITGIVVTKLDGSAKGGAVVAICRELKIPIKLVGVGEGIDDLQPFDADAYVEAL 459          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_BACSU (Cell division protein ftsY homolog OS=Bacillus subtilis GN=ftsY PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 89/188 (47.34%), Postives = 132/188 (70.21%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 580
            T++GKLA+++K EG   ++AAGDTFRA A +QLE+W ERTG   V+ +   +  ++V+  AV   K +  D+++CDT+GRL    +LM+EL   K+ + + V  AP+E+ L LD TTG N + QA+EF+    +TG+ LTKLDG+A+GG V+++ +EL IPVK VG+GE V+DLQ FD E++V  +FS
Sbjct:  135 TTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVP-VIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHEVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLFS 321          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_ECOLI (Cell division protein ftsY OS=Escherichia coli (strain K12) GN=ftsY PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44
Identity = 83/190 (43.68%), Postives = 133/190 (70.00%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS*E 586
            T++GKLA + + +G   ++AAGDTFRAAA +QL++W +R     V+A+   A ++SV+  A++  K +  D+++ DT+GRL     LMEEL    + + K+   AP+E+ L +D +TG N + QA+ F++ VG+TG+ LTKLDG+A+GG + SV D+ GIP++++GVGE +EDL+PF A+ F+ A+F+ E
Sbjct:  308 TTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIP-VIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARE 496          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_NEIMC (Cell division protein ftsY homolog OS=Neisseria meningitidis serogroup C GN=ftsY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 87/186 (46.77%), Postives = 127/186 (68.28%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            TS+GKLA   + +G   L+AAGDTFRAAA +QL+ W ER    + V       +++V   AV+  K +G DIVL DT+GRL T   LMEE+   K+ + K +  AP+EI +VLD   G N + Q + F+D +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFDA AFV+A+
Sbjct:  236 TSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_NEIMB (Cell division protein ftsY homolog OS=Neisseria meningitidis serogroup B GN=ftsY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 87/186 (46.77%), Postives = 127/186 (68.28%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            TS+GKLA   + +G   L+AAGDTFRAAA +QL+ W ER    + V       +++V   AV+  K +G DIVL DT+GRL T   LMEE+   K+ + K +  AP+EI +VLD   G N + Q + F+D +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFDA AFV+A+
Sbjct:  236 TSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_NEIMA (Cell division protein ftsY homolog OS=Neisseria meningitidis serogroup A GN=ftsY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 87/186 (46.77%), Postives = 127/186 (68.28%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            TS+GKLA   + +G   L+AAGDTFRAAA +QL+ W ER    + V       +++V   AV+  K +G DIVL DT+GRL T   LMEE+   K+ + K +  AP+EI +VLD   G N + Q + F+D +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFDA AFV+A+
Sbjct:  236 TSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_THEAQ (Cell division protein ftsY OS=Thermus aquaticus GN=ftsY PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.140e-43
Identity = 87/186 (46.77%), Postives = 124/186 (66.67%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            T++ KL    +N G K +  AGDTFRAA   QL  W +R    ++    E    +++   AV+  K +G+D++  DT+GRLHT ++LMEEL   K+A+ K     P E+ LVLD  TG N L QA++F++ VG+TG+I+TKLDG+A+GG ++ +V  L +P+KFVGVGEG +DLQPFD EAFV A+
Sbjct:  117 TTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGP-EGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEAL 301          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_MYCTU (Cell division protein ftsY homolog OS=Mycobacterium tuberculosis GN=ftsY PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.158e-41
Identity = 94/186 (50.54%), Postives = 124/186 (66.67%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            T++GKLA  L  +G + ++ A DTFRAAA+DQL+ WA R G  +V    E A  +SV   AV +G   G D+VL DT+GRLHT   LM+EL   K+ V +    + +E+ LVLD T G N L QAR F +VV I+G +LTKLDG+A+GG V  V  ELG+PVK VG+GEG +DL PF+  AFV+A+
Sbjct:  238 TTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVVRGP-EGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTR--RASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDAL 420          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_MYCBO (Cell division protein ftsY homolog OS=Mycobacterium bovis GN=ftsY PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.158e-41
Identity = 94/186 (50.54%), Postives = 124/186 (66.67%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 574
            T++GKLA  L  +G + ++ A DTFRAAA+DQL+ WA R G  +V    E A  +SV   AV +G   G D+VL DT+GRLHT   LM+EL   K+ V +    + +E+ LVLD T G N L QAR F +VV I+G +LTKLDG+A+GG V  V  ELG+PVK VG+GEG +DL PF+  AFV+A+
Sbjct:  238 TTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVVRGP-EGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTR--RASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDAL 420          
BLAST of FC923597 vs. ExPASy Swiss-Prot
Match: FTSY_MYCHP (Cell division protein ftsY homolog OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=ftsY PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.512e-41
Identity = 82/183 (44.81%), Postives = 127/183 (69.40%), Query Frame = 2
Query:   17 TSLGKLAYRLKNEGTKTLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIPLVLDGTTGLNTLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 565
            TS+ K+A +L +EG K L+AAGDTFRAAA +QLEIWA+R G +IV     +   ++V+ +A+   K + +DI++ DT+GRL    +LM EL    + +   +  AP+E  LVLD TTG N + QAR F +   +TG+ILTK+DG+++GG V+++ DE+G+ VK++G+GE V+DL  FD ++++
Sbjct:  160 TSISKIAKKLIDEGKKVLIAAGDTFRAAAVEQLEIWAKRVGADIVTPNENEVDPAAVVYRAIDIAKSKKYDILIVDTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATTGQNGVIQARVFKESTPLTGIILTKMDGTSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEFDLDSYI 342          
The following BLAST results are available for this feature:
BLAST of FC923597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
FTSY_AQUAE4.691e-5152.69Cell division protein ftsY homolog OS=Aquifex aeol... [more]
FTSY_BACSU1.322e-4547.34Cell division protein ftsY homolog OS=Bacillus sub... [more]
FTSY_ECOLI9.473e-4443.68Cell division protein ftsY OS=Escherichia coli (st... [more]
FTSY_NEIMC2.110e-4346.77Cell division protein ftsY homolog OS=Neisseria me... [more]
FTSY_NEIMB2.110e-4346.77Cell division protein ftsY homolog OS=Neisseria me... [more]
FTSY_NEIMA2.110e-4346.77Cell division protein ftsY homolog OS=Neisseria me... [more]
FTSY_THEAQ6.140e-4346.77Cell division protein ftsY OS=Thermus aquaticus GN... [more]
FTSY_MYCTU1.158e-4150.54Cell division protein ftsY homolog OS=Mycobacteriu... [more]
FTSY_MYCBO1.158e-4150.54Cell division protein ftsY homolog OS=Mycobacteriu... [more]
FTSY_MYCHP1.512e-4144.81Cell division protein ftsY homolog OS=Mycoplasma h... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31706H08EF StrClemenN Citrus clementina cDNA clone C31706H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923597 ID=FC923597; Name=FC923597; organism=Citrus clementina; type=EST; length=686bp
ATGGTGGTGGAATCCAACATCACTAGGAAAGCTGGCATATAGATTAAAGA
ACGAAGGGACAAAGACACTGATGGCAGCAGGTGACACTTTTAGAGCAGCC
GCTAGTGATCAACTGGAAATATGGGCAGAGAGGACTGGTTGTGAGATTGT
TGTGGCTGAAGGAGAGAAGGCCAAAGCATCATCAGTTCTTTCACAGGCTG
TGAAAAGAGGGAAAGAACAGGGTTTTGATATTGTTTTGTGTGACACATCT
GGACGTCTCCACACAAACTACAGCCTGATGGAAGAGTTGGTTGCATGCAA
GAAAGCTGTGGGCAAAGTTGTTAACGGTGCACCTAATGAGATCCCACTAG
TTCTGGATGGGACTACTGGCTTGAATACGCTTCCACAAGCAAGAGAATTT
AATGATGTTGTCGGAATAACTGGTTTAATTTTGACAAAGCTGGATGGTTC
TGCTAGAGGTGGCTGTGTGGTCAGTGTCGTCGATGAGCTTGGCATTCCTG
TAAAGTTTGTGGGTGTTGGTGAAGGTGTGGAGGACCTACAACCCTTCGAT
GCAGAGGCCTTTGTTAATGCCATATTTTCATGAGAACTGAAAGTGATTCA
TTGTTCAATCAAACTATTAGTTTTTTGGCGAAATAGGATGGCTAAAGGCT
GAGCAGTTTACTCTATTAAAAGTGNCAGACATTTAT
back to top