FC923602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923602 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 3.870e-67 Identity = 144/242 (59.50%), Postives = 171/242 (70.66%), Query Frame = 2 Query: 23 SLISSSTFLLSRSPNTTLAPLNKHN--------FPLRPSRARATAATIICCSNSPTTSATRSIVSKLLLFTKPXXXXXXXFESLFVFCGSVVLSFTLLFSN--VDSASAFVVTPQRKLQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLFVGQKVYAIGN 718 SL+ SST L P++ L+ N + +P+R R + + N+ R L FT + F+ C SV LSF+L ++ V+SASAFVV+ +KLQTDELATVRLFQENTPSVV ITNLA RQDAFTLDVLEVPQGSGSGFVWD +GH+VTNYHVIRGASD+RVT ADQ+ +DAK+VGFDQDKDVAVLRIDAPK+KLRPIP+GVSADL VGQKV+AIGN Sbjct: 8 SLLLSSTLFLHSPPSSHLSFFNLSSSRSSPISLYPIRSKRYFRILSKLSLNDNN------RDDDDDTLHFTP-----FSAVKPFFLLCTSVALSFSLFAASPAVESASAFVVSTPKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGN 238
BLAST of FC923602 vs. ExPASy Swiss-Prot
Match: DEGP8_ARATH (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23 Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 326 VTPQRKLQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIR-------------GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLFVGQKVYAIGN 718 V P L E V+LF++NT SVVNI ++ R V+E+P+G+GSG VWD +G++VTNYHVI G +I + Q ++ K+VG D+ KD+AVL++DAP+ L+PI +G S L VGQ+ AIGN Sbjct: 106 VFPAGPLFPTEGRIVQLFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGN 249
BLAST of FC923602 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 67/179 (37.43%), Postives = 98/179 (54.75%), Query Frame = 2 Query: 248 LFVFCGSVVLSFTLLFSN-----VDSASAFVVTPQRK--LQTDELATVRLFQENTPSVVNITNL----AARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIR-------GASDIRVTFADQS----AYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLFVGQKVYAIGN 718 + +F S+ L+ +LL SN ++SA A +++ L+ +E V LFQ+ +PSVV I + + D T + +G+GSGFVWD GH+VTNYHVI G +V+ D + + KIVG D D D+AVL+I+ +L P+ +G S DL VGQ +AIGN Sbjct: 45 IMIFGSSLALTSSLLGSNQQRLPMESAIALEQFKEKEEELEEEEERNVNLFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGN 223
BLAST of FC923602 vs. ExPASy Swiss-Prot
Match: Y938_SYNP6 (Uncharacterized serine protease syc0938_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc0938_d PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 455 EVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLFVGQKVYAIGN 718 EV +G GSGFV D G ++TN HV+ A +RVT D + ++ G D D+A++ +D ++L IG S+++ VG AIGN Sbjct: 119 EVQRGQGSGFVVDGNGLIMTNAHVVANADQVRVTLRDGREFTGRVRGADSVTDLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGN 206 The following BLAST results are available for this feature:
BLAST of FC923602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923602 ID=FC923602; Name=FC923602; organism=Citrus clementina; type=EST; length=719bpback to top |