FC923608

Overview
NameFC923608
Unique NameFC923608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14340 contig Ccv1_Contig14340:3..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.965e-74
Identity = 136/243 (55.97%), Postives = 173/243 (71.19%), Query Frame = 3
Query:   15 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDXVLANLDRQ 737
            MA++S+  +++ L  +      +++QLSTN+Y  TCPK    V++G+ +A+  E R+GASLLRL FHDCFVNGCD SVLLDDT++F GE+TAVPN NS RG NV+D IK+ +E  CP VVSCADI+AIAARDSVV+ GGP W V+LG               IPPPTS+LS LIS F AQGLS ++MVAL+G HT+G+ARCTSFR  IYN++NID+SFA++ Q  CP      D  LA LD Q
Sbjct:    1 MASSSFSIVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETNIDSSFAKTRQASCPSASGSGDNNLAPLDLQ 243          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.118e-70
Identity = 133/239 (55.65%), Postives = 171/239 (71.55%), Query Frame = 3
Query:   39 LLLILTFVTATLDQANS------QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDXVLANLD 731
            L+ IL  V   L Q ++      QL+TN+Y ++CP  LS V+  + +A+ +E R+GAS+LRL FHDCFVNGCDGS+LLDDT++F GE+ A PN NSARGFNV+D IK+ +EKACP VVSCADILAIAARDSVV  GGP+W V++G               IP PTS+LS LISSFSA GLS ++MVAL+G HT+G++RCT+FR  IYN++NI+ +FA + Q+ CPR     D  LA LD
Sbjct:    6 LISILVLVVTLLLQGDNNYVVEAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETNINAAFATTRQRTCPRASGSGDGNLAPLD 244          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.629e-66
Identity = 121/216 (56.02%), Postives = 153/216 (70.83%), Query Frame = 3
Query:   84 NSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            ++QLS+N+Y + CP ALS +++ + +A+  E R+GASLLRLHFHDCFV GCD SVLLDDT+NF GEKTA PN NS RGF V+D IK+ +E  CP VVSCADILA+AARDSVV  GG SW V LG               +P P  NLS LIS+FS +G + K +V L+G HT+G+A+CT+FR  IYN+SNID ++A+SLQ  CP  G D  L+  D
Sbjct:   21 SAQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFD 236          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 250.751 bits (639), Expect = 5.856e-66
Identity = 121/216 (56.02%), Postives = 160/216 (74.07%), Query Frame = 3
Query:   90 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDXVLANLD 731
            QL+TN+Y ++CP  LS V++G+ +A+ ++ R+GAS+LRL FHDCFVNGCDGS+LLDDT++F GE+ A PN NSARGF V++ IK+ +EKACP VVSCADILAIAARDSVV  GGP+W V++G               IP P+ +LS LISSFSA GLS ++MVAL+G HT+G++RC +FR  +YN++NI+ +FA   Q+ CPR     D  LA LD
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETNINAAFATLRQRSCPRAAGSGDANLAPLD 216          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.957e-65
Identity = 123/233 (52.79%), Postives = 160/233 (68.67%), Query Frame = 3
Query:   42 LLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLG-XXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDXVLANLD 731
            +++L  +     Q+ +QL+ ++YK +CP    +VR  +  A+  E R+GASLLRL FHDCFVNGCDGS+LLDDT +F+GEKT+ P+NNS RGF V+D+IK  +EK CP +VSCADILAI ARDSV++ GGP W V+LG                IPPP + LS LI+ F AQGLS ++MVAL+G HT+G+A+C +FR  IYN SNIDTSFA S ++ CP      D   ANLD
Sbjct:    4 VVLLMMIMMLASQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASNIDTSFAISKRRNCPATSGSGDNKKANLD 236          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.553e-63
Identity = 123/241 (51.04%), Postives = 164/241 (68.05%), Query Frame = 3
Query:   15 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCP-RRGN-DXVLANLD 731
            MA++S+  L +++    A    A++QLS  +Y  +CP+AL+ ++A + AA+  E R+GASLLRLHFHDCFV GCDGSVLL+DTA F GE+TA PN  S RGF VVD IKA +E  CP VVSCADILA+AARDSVV  GGPSW+V LG               +P P+ +L+ L ++F+ + LS  ++VAL+G HT+G A+C +FR HIYND+N++ +FA   +  CP   GN D  LA LD
Sbjct:    1 MASSSFTSLSVMVLLCLAAAAVASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTNVNAAFATLRRANCPAAAGNGDGNLAPLD 241          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62
Identity = 116/218 (53.21%), Postives = 148/218 (67.89%), Query Frame = 3
Query:   45 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXI-PPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCP 695
            ++L F+     QA +QL T++Y  +CP  L  VR  +   +  E R+ ASLLRL FHDCFVNGCD S+LLDDT +F+GEKTA PNNNS RG+ V+D IK+ +E+ CP VVSCADILAI ARDSV++ GG  W V+LG               + PPPTS L  LI+ F A GLS ++MVAL+G HT+G+ARC +FR  IYN +NID SFA S ++ CP
Sbjct:   14 VVLLFIVMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNSTNIDLSFALSRRRSCP 231          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 4.801e-60
Identity = 118/245 (48.16%), Postives = 155/245 (63.27%), Query Frame = 3
Query:   24 TSYYFLLLILTFVTATLDQAN--SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            TS+  LL ++ FV   L   +   +L   YY  +CP+   IVR+ +  A+  ETR+ ASLLRLHFHDCFV GCDGS+LLD +     EK + PN+ SARGF+VVDQIKA LEK CP  VSCAD+L +AARDS V+ GGPSW V LG               IP P +    ++S F+ QGL + ++VAL+G HT+G +RCTSFR  +YN       D  ++ SFA +L+QRCP+ G D +L+ LD
Sbjct:    5 TSFLLLLSLICFVPLCLCDKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLD 249          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.190e-60
Identity = 116/232 (50.00%), Postives = 160/232 (68.97%), Query Frame = 3
Query:   39 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPN-NNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            LL+++     +   A++QLS+ +Y ++CP A+S + +G+ +A+  + RVGASLLRLHFHDCF+ GCD S+LL+DT+   GE+T  PN   + R F+VV+ IKA +E ACP VVSCADILA+AARD VV  GGPSW V LG               +PPPTS+L AL++++S + L   +MVAL+G HT+G+A+C+SF GHIYND+NI+ +FA SL+  CP  G    LA LD
Sbjct:   13 LLVVVVAAALSASTASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLG-RRDSTGSFPSQTSDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYNDTNINAAFATSLKANCPMSGGSS-LAPLD 239          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.055e-59
Identity = 116/225 (51.56%), Postives = 158/225 (70.22%), Query Frame = 3
Query:   60 VTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPN-NNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            + A    A++QLS+ +Y  +CP ALS +R+G+ +A++ E RVGASLLRLHFHDCFV GCD S+LL+DT+   GE++  PN   + RGF VV+ IKA +E  CP +VSCADILA+AARD VV  GGPSW V LG               +PPPTS+L  L+S+++ + L+  +MVAL+G HT+G+A+C+SF  HIYND+NI+++FA SL+  CPR G+   LA LD
Sbjct:   20 LVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLG-RRDSTASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTNINSAFAASLRANCPRAGS-TALAPLD 239          
The following BLAST results are available for this feature:
BLAST of FC923608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER4_VITVI9.965e-7455.97Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER52_ARATH5.118e-7055.65Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER1_ARAHY2.629e-6656.02Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PERP7_BRARA5.856e-6656.02Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER67_ARATH4.957e-6552.79Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER70_MAIZE3.553e-6351.04Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER68_ARATH5.130e-6253.21Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER49_ARATH4.801e-6048.16Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER42_MAIZE8.190e-6050.00Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER66_MAIZE9.055e-5951.56Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31707A07EF StrClemenN Citrus clementina cDNA clone C31707A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923608 ID=FC923608; Name=FC923608; organism=Citrus clementina; type=EST; length=738bp
GAGAAGTGCTAGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATA
CTTACTTTTGTCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAAC
AAACTACTACAAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAG
GGATTATAGCTGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTT
CGACTTCATTTCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACT
GTTGGATGATACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACA
ATAACTCGGCCAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTG
GAGAAAGCATGCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGC
CGCACGCGATTCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGAT
TGGGAAGAAGAGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCC
ATCCCTCCACCCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGC
ACAGGGTCTCTCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGG
TAGGCAAGGCAAGGTGCACATCATTTCGAGGACACATTTACAACGATTCC
AATATTGACACCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAG
AGGAAATGACNATGTTCTGGCAAACCTTGACCGTCAAA
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