FC923613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923613 vs. ExPASy Swiss-Prot
Match: SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.994e-77 Identity = 145/190 (76.32%), Postives = 170/190 (89.47%), Query Frame = 1 Query: 124 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIASAVNEELDLHTRLIDDLDQHVDVTDSRLR 693 MAS+SDSW++ YNEA+KL+++INGMISERSS +GP++QR ASAIRRKITI G +LDSLQSLL+++ GK PISEKEMNRRKDM+ NLRSK NQMA+ LNMSNFANRDSLLGP+IK D M+R TG+DNQG+VG+QRQ+MREQDEGLE+LE TV+STKHIA AV+EELDL TRLIDDLD HVDVTDSRLR Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSLQSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLR 189
BLAST of FC923613 vs. ExPASy Swiss-Prot
Match: SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77 Identity = 143/190 (75.26%), Postives = 168/190 (88.42%), Query Frame = 1 Query: 124 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIASAVNEELDLHTRLIDDLDQHVDVTDSRLR 693 MAS+SD W++EYNEA+KL++DINGM+SER++ +GP++QR ASAIRRKITILGTRLDSLQSLL K+PGKQ +SEKEMNRRKDM+ NLRSK NQ+AS LNMSNFANRDSL G ++K D +NR +G+DNQG+V FQRQ+MREQDEGLEKLEETV+STKHIA AVNEEL L TRLIDDLD VD+TDSRLR Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLR 190
BLAST of FC923613 vs. ExPASy Swiss-Prot
Match: STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 62/200 (31.00%), Postives = 103/200 (51.50%), Query Frame = 1 Query: 139 DSWIKEYNEAIKLADDINGMISERSSMPASGPES-QRHASA-IRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLN--MSNFANRDSLLGPEIK-SADVMNRATG----------LDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIASAVNEELDLHTRLIDDLDQHVDVTDSRLR 693 D W+ E++ +KL + + I E S + P Q++ A +R + + + LQ L+ + I EKE+ RRK+ + +L S NQ+ STL+ ++N + ++ L+G NR G DNQ L Q+ IMREQDE L+ L ++++ K++A A++ ELD H ++DD++ D RLR Sbjct: 3 DYWLNEHDNIVKLINSLTADIKEYSIQQRNNPGIVQKNTPAKLRNGLVHITNEILRLQDSLT-YGNNRNIQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIGTDAVSMRLR 201
BLAST of FC923613 vs. ExPASy Swiss-Prot
Match: STX8_RAT (Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 54/202 (26.73%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 133 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIASAVNEELDLHTRLIDDLDQHVDVTDSRLR 693 A D W Y+ ++A +I I ER+ G ++ + IR + L ++D L+ LL + + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGSEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 198
BLAST of FC923613 vs. ExPASy Swiss-Prot
Match: STX8_MOUSE (Syntaxin-8 OS=Mus musculus GN=Stx8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 54/202 (26.73%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 133 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIASAVNEELDLHTRLIDDLDQHVDVTDSRLR 693 A D W Y+ ++A +I I ER+ G ++ + IR + L ++D L+ LL + + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 198
BLAST of FC923613 vs. ExPASy Swiss-Prot
Match: STX8_HUMAN (Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 52/202 (25.74%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 133 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIASAVNEELDLHTRLIDDLDQHVDVTDSRLR 693 A D W Y+ ++A +I I +R+ G ++ + IR + L ++ L+ LL + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 198 The following BLAST results are available for this feature:
BLAST of FC923613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923613 ID=FC923613; Name=FC923613; organism=Citrus clementina; type=EST; length=693bpback to top |