FC923614

Overview
NameFC923614
Unique NameFC923614
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14052 contig Ccv1_Contig14052:79..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 349.362 bits (895), Expect = 1.210e-95
Identity = 169/219 (77.17%), Postives = 192/219 (87.67%), Query Frame = 2
Query:   80 MSCFGCCEEDDMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADFD 736
            MSCF CC++DDMH+A DNG  +M  +SAG +G   A+E+A +  Q V +QPI VP+I+VDELK+IT+NFG+ ALIGEGSYGRVY+G+LKSG AAAIKKLD+SKQPD EFLAQVSMVSRLK EN V+LLGYCVDG  RVLAYE+A NGSLHDILHGRKGVKGAQPGPVLSW QRVKIAVGAAKGLEYLHEKA PHIIHRDIKS ++L+FDDDVAKIADFD
Sbjct:    1 MSCFSCCDDDDMHRATDNG-PFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFD 218          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 6.869e-91
Identity = 166/223 (74.44%), Postives = 188/223 (84.30%), Query Frame = 2
Query:   80 MSCFGCC-EEDDMHKAADNGNAYMVKSS--AGTDGAYH-ASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADFD 736
            MSCFGCC E+DDMHK AD G  +        G D  +H ASE A KG   VK+QPIEVP I   ELKE T++FG+N+LIGEGSYGRVYYG+L +   +AIKKLD++KQPD EFLAQVSMVSRLKH+NFVQLLGYCVDG SR+L+YEFA+NGSLHDILHGRKGVKGAQPGPVLSW QRVKIAVGAA+GLEYLHEKA+PHIIHRDIKS +VL+F+DDVAKIADFD
Sbjct:    1 MSCFGCCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFD 223          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.349e-64
Identity = 121/223 (54.26%), Postives = 159/223 (71.30%), Query Frame = 2
Query:   95 CCEEDDMHKAADNGNAYMVKSS-------AGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS--KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADFD 736
            CC   D   A    N Y    +        G +     +  AP+     KV PIE+P++++DEL  +  NFG  ALIGEGSYGRV+ G  K G A AIKKLDAS  ++PD +F +Q+S+VSRLKH++FV+LLGYC++  +R+L Y+FA+ GSLHD+LHGRKGV+GA+PGPVL+W QRVKIA GAAKGLE+LHEK  P I+HRD++S +VL+FDD VAK+ADF+
Sbjct:    3 CCGGADEEPAGPPANQYAAPPNKAGNPNFGGGNRGEPRNPNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFN 224          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = 2
Query:  203 KGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            K A ++ +   E P   ++  +L + T  F  ++LIG G +G VY  ILK G A AIKKL   S Q D EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL D+LH  K     + G  L+W  R KIA+G+A+GL +LH    PHIIHRD+KS +VL+ ++  A+++DF
Sbjct:  854 KEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPK-----KAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDF 1028          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34
Identity = 81/198 (40.91%), Postives = 116/198 (58.59%), Query Frame = 2
Query:  170 DGAYHASEA-------APKGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            DG  H++ A       + + A ++ +   E P   ++  +L E T  F  ++L+G G +G VY   LK G   AIKKL   S Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK +     G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KS +VL+ ++  A+++DF
Sbjct:  841 DGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKI-----GIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDF 1033          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.910e-34
Identity = 81/198 (40.91%), Postives = 116/198 (58.59%), Query Frame = 2
Query:  170 DGAYHASEA-------APKGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            DG  H++ A       + + A ++ +   E P   ++  +L E T  F  ++L+G G +G VY   LK G   AIKKL   S Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK     + G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KS +VL+ ++  A+++DF
Sbjct:  841 DGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRK-----KTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDF 1033          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34
Identity = 75/164 (45.73%), Postives = 104/164 (63.41%), Query Frame = 2
Query:  245 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            A + +EL + T NF     +G G YG+VY G L +G   AIK+    S Q   EF  ++ ++SR+ H+N V+LLG+C D   ++L YE+  NGSL D L G+ GVK       L W +R+KIA+G+ KGL YLHE ADP IIHRD+KS ++L+ +   AK+ADF
Sbjct:  621 AFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-------LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADF 777          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.650e-33
Identity = 77/176 (43.75%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  215 AVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            ++ V   E P   ++   L E T  F  +++IG G +G VY   L  G   AIKKL   + Q D EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH  K  KG   G  L W  R KIA+GAA+GL +LH    PHIIHRD+KS +VL+  D VA+++DF
Sbjct:  833 SINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLH-EKTKKG---GIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDF 1004          

HSP 2 Score: 22.3274 bits (46), Expect = 1.650e-33
Identity = 9/27 (33.33%), Postives = 18/27 (66.67%), Query Frame = 3
Query:   87 ASAVVKKMICIKLLTMAMHTWLKVQQE 167
            ++ +V   +CI +L MA++   KVQ++
Sbjct:  778 SAGIVFSFMCIVMLIMALYRARKVQKK 804          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 93/237 (39.24%), Postives = 121/237 (51.05%), Query Frame = 2
Query:   80 MSCFGCCEEDDMHKA--ADNGNAYMVKSSAGT---------DGAYHASEAAPKGAQAVKVQP------IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            M CF C +  D  K    D  N    K S  T          G    S     G++   + P      I     +  EL   T NF  +  +GEG +GRVY G L S G   A+K+LD +  Q + EFL +V M+S L H N V L+GYC DG  R+L YEF   GSL D LH     K A     L W  R+KIA GAAKGLE+LH+KA+P +I+RD KS ++L+ +    K++DF
Sbjct:    1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEA-----LDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDF 232          
BLAST of FC923614 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.246e-33
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 2
Query:  248 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG-RKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSQHVLIFDDDVAKIADF 733
            +   +L E T  F   ++IG G +G V+   LK G + AIKKL   S Q D EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL ++LHG R G K      +L W++R KIA GAAKGL +LH    PHIIHRD+KS +VL+  D  A+++DF
Sbjct:  826 LKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRR----ILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDF 985          
The following BLAST results are available for this feature:
BLAST of FC923614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 443
Match NameE-valueIdentityDescription
PTI1_SOLLC1.210e-9577.17Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2706_ARATH6.869e-9174.44Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH9.349e-6454.26Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
BRI1_ARATH4.093e-3543.89Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRI1_SOLLC4.525e-3440.91Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_SOLPE5.910e-3440.91Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y5977_ARATH7.719e-3445.73Probable leucine-rich repeat receptor-like protein... [more]
BRL3_ARATH1.650e-3343.75Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
PBS1_ARATH1.720e-3339.24Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
BRL2_ARATH2.246e-3346.34Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC31707B01EF StrClemenN Citrus clementina cDNA clone C31707B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923614 ID=FC923614; Name=FC923614; organism=Citrus clementina; type=EST; length=736bp
GATTCAAAATATCCAGCTCGTTGCTTTTCTCTATATCTCAGCTAGCTTTC
ATAGAGGGGCATTATTGTGGCAGTGAATCATGAGCTGCTTCGGCTGTTGT
GAAGAAGATGATATGCATAAAGCTGCTGACAATGGCAATGCATACATGGT
TAAAAGTTCAGCAGGAACTGATGGAGCCTATCATGCATCTGAAGCAGCAC
CTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATT
TCAGTGGATGAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTT
GATTGGAGAAGGTTCATATGGAAGAGTATATTATGGGATTCTTAAAAGTG
GACATGCTGCAGCAATAAAAAAGTTGGATGCCAGCAAGCAACCTGATGAG
GAGTTTTTAGCACAGGTTTCCATGGTATCAAGGTTGAAGCATGAAAACTT
TGTTCAGCTGCTCGGGTATTGTGTTGATGGGACTTCCCGTGTGCTTGCCT
ACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAGGAAA
GGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGT
GAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAGAAGG
CAGATCCTCATATTATCCATCGCGATATTAAGTCCCAGCATGTACTAATT
TTTGATGATGATGTAGCAAAGATTGCCGACTTTGAT
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