FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 6.199e-100
Identity = 170/209 (81.34%), Postives = 184/209 (88.04%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQG-TRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            I E FDFHEKELESEE LW LYERWRSHHTVSRSL EK KRFNVFK N MHVH  NKMDKPYKLKLNKFADMTNHEF +TY+GSK+KHHRMF+G  RGNGTFMY KV ++P+SVDWRKKG+VT+VKDQGQCGSCWAFSTI AVEGIN I TNKLVSLSEQELVDC    NQGCNGGLM+ AFEFIK++GG+TTEA YPY +YDGTCDVS
Sbjct:   17 ITESFDFHEKELESEESLWGLYERWRSHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVS 225          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.355e-99
Identity = 169/210 (80.48%), Postives = 185/210 (88.10%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTR-GNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            G+   FDFHEK+LESEE LWDLYERWRSHHTVSRSL EKHKRFNVFK NVMHVH TNKMDKPYKLKLNKFADMTNHEF STYAGSK+ HH+MF+G++ G+GTFMY KV S+P+SVDWRKKG+VT VKDQGQCGSCWAFSTI AVEGIN I TNKLVSLSEQELVDC    NQGCNGGLME AFEFIK+KGG+TTE+ YPY + +GTCD S
Sbjct:   18 GVANSFDFHEKDLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDES 227          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 351.673 bits (901), Expect = 2.438e-96
Identity = 164/210 (78.10%), Postives = 179/210 (85.24%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGT-RGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            G+   FDFH+K+L SEE LWDLYERWRSHHTVSRSL EKHKRFNVFK N+MHVH TNKMDKPYKLKLNKFADMTNHEF STYAGSK+ H RMF+GT   NG FMY KV S+P SVDWRKKG+VT VKDQGQCGSCWAFST+ AVEGIN I TNKLV+LSEQELVDC    NQGCNGGLME AFEFIK+KGG+TTE+ YPY + +GTCD S
Sbjct:   18 GVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDAS 227          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 9.013e-75
Identity = 137/208 (65.87%), Postives = 163/208 (78.37%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGN-GTFMYGKVTSIPS-SVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            I +   F EK+L SE+ LW+LYE+WR+HHTV+R LDEK++RFNVFK+NV  +H+ N K D PYKL LNKF DMTN EF S YAGSKI+HHR  +G + N G+FMY  V S+P+ S+DWR KG+VT VKDQGQCGSCWAFSTIA+VEGIN I T +LVSLSEQELVDC    N+GCNGGLM+ AFEFI +K G+TTE  YPY   DGTC
Sbjct:   19 IAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFI-QKNGITTEDSYPYAEQDGTC 225          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.441e-58
Identity = 113/203 (55.67%), Postives = 139/203 (68.47%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG--KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            +K+LESEE LWDLYERW+S H V R   EKH+RF  FK N   +H  NK  D PY+L LN+F DM   EF +T+ G  ++     +     G FMY    V+ +P SVDWR+KG+VT VKDQG+CGSCWAFST+ +VEGIN I T  LVSLSEQEL+DC    N GC GGLM+ AFE+IK  GG+ TEA YPY +  GTC+V+
Sbjct:   33 DKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGD-LRRDTPSKPPSVPG-FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVA 233          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.441e-58
Identity = 113/203 (55.67%), Postives = 139/203 (68.47%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG--KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            +K+LESEE LWDLYERW+S H V R   EKH+RF  FK N   +H  NK  D PY+L LN+F DM   EF +T+ G  ++     +     G FMY    V+ +P SVDWR+KG+VT VKDQG+CGSCWAFST+ +VEGIN I T  LVSLSEQEL+DC    N GC GGLM+ AFE+IK  GG+ TEA YPY +  GTC+V+
Sbjct:   33 DKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGD-LRRDTPAKPPSVPG-FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVA 233          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.072e-51
Identity = 101/202 (50.00%), Postives = 134/202 (66.34%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDV 732
            +  ++LES + L +L+E W S+   +  +++EK  RF VFK N+ H+ +TNK  K Y L LN+FAD+++ EF   Y G K    R  +  R    F Y  V ++P SVDWRKKG+V  VK+QG CGSCWAFST+AAVEGIN I+T  L +LSEQEL+DC    N GCNGGLM+ AFE+I K GG+  E  YPY   +GTC++
Sbjct:   36 YSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDE-ERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEM 236          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.003e-49
Identity = 97/197 (49.24%), Postives = 129/197 (65.48%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + L + + L +L+E W S H+ + +S++EK  RF VF++N+MH+ Q N     Y L LN+FAD+T+ EF   Y G  +   +  +  + +  F Y  +T +P SVDWRKKG+V  VKDQGQCGSCWAFST+AAVEGIN I T  L SLSEQEL+DC    N GCNGGLM+ AF++I   GG+  E  YPY   +G C
Sbjct:   39 EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGIC 233          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.003e-49
Identity = 100/197 (50.76%), Postives = 129/197 (65.48%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRS---LDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKV-TSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            SE  +  +YE W   H  ++S   L EK +RF +FK N+  V + N+ +  Y+L L +FAD+TN E+ S Y G+K++     +G R        +V   +P S+DWRKKG+V  VKDQG CGSCWAFSTI AVEGIN I+T  L++LSEQELVDC    N+GCNGGLM+ AFEFI K GG+ T+  YPY   DGTCD
Sbjct:   42 SEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEK----KGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCD 234          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.313e-46
Identity = 96/196 (48.98%), Postives = 125/196 (63.78%), Query Frame = 1
Query:  172 LYERWRSHHTVSRS-----LDEKHKRFNVFKQNVMHV--HQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG---KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            +Y RW   H  S S     ++++ +RFN+FK N+  +  H  N  +  YKL L  FA++TN E+ S Y G++ +  R     + N    Y     V  +P +VDWR+KG+V A+KDQG CGSCWAFST AAVEGIN I+T +LVSLSEQELVDC    NQGCNGGLM+ AF+FI K GG+ TE  YPY   +G C+
Sbjct:    3 IYLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAK-NVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCN 197          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSEP_RICCO6.199e-10081.34Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSEP_VIGMU2.355e-9980.48Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_PHAVU2.438e-9678.10Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP_HEMSP9.013e-7565.87Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSP2_HORVU3.441e-5855.67Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU3.441e-5855.67Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
XCP2_ARATH1.072e-5150.00Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
XCP1_ARATH1.003e-4949.24Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
RD21A_ARATH1.003e-4950.76Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP4_BRANA2.313e-4648.98Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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