FC923658

Overview
NameFC923658
Unique NameFC923658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.068e-50
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 2
Query:   53 MMGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRV-ASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVKLKC----QSYGHDKLEFQVFFNDLVSNDFNALYKSLP--SDRQYYAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTPKELNDQNSPAYNKGRIYYSRGPNEVVEAYSAESAKGIESFLLARAQELASGGLMALIVPCLPDGISPGECSVLASADLLGDCLM 745
            M GGDG +SY  NS +Q   ++  K   +  I +KLDL  +  +S   +  I D GCS+GPNTF+ VQNIID+VK K     ++Y    LEFQV FND  +NDFN L+++ P  S ++Y++ GVPGSFH R+ PK S++  H SY L WLS+ P+ + D+ SPA NK  I  +   +EV +AY  +  K    FL ARA+EL SGGLM L   CLPDGI           D++GDCLM
Sbjct:   10 MNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDFGCSIGPNTFDVVQNIIDTVKQKRLKENKTYIGAPLEFQVCFNDQPNNDFNTLFRTQPFFSRKEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILSGQCLPDGIPKALTWQGVVIDMIGDCLM 247          
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.701e-50
Identity = 110/245 (44.90%), Postives = 151/245 (61.63%), Query Frame = 2
Query:   29 SESVSSQAMMGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRVASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVKLKCQSYGHDK-----LEFQVFFNDLVSNDFNALYKSLP--SDRQYYAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTPKELNDQNSPAYNKGRIYYSRGPNEVVEAYSAESAKGIESFLLARAQELASGGLMALIVPCLPDGISPGECSVLASADLLGDCL 742
            S S  S  M GGD Q+SY  NS +Q  G++  +    + I + LDL  +  + S  F+IAD GCS+GPNTF+AVQNIID VKLK      +      LEFQV+FNDL +NDFN L+++ P  S ++Y++ GVPGSF+ R+ P+ SI+  + S+   WLS  P+E+ D+NS A+NK  I+ +    EV EAY  +  K +  FL ARA+EL  GGLM  +  CLPDG++  E       D +GDCL
Sbjct:    2 STSSQSYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLS-TFTIADFGCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPSSKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHCNNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMITLGQCLPDGVAMYETWSGIVKDTIGDCL 245          
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.341e-49
Identity = 109/238 (45.80%), Postives = 141/238 (59.24%), Query Frame = 2
Query:   53 MMGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRV-ASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVKLKC----QSYGHDKLEFQVFFNDLVSNDFNALYKSLP--SDRQYYAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTPKELNDQNSPAYNKGRIYYSRGPNEVVEAYSAESAKGIESFLLARAQELASGGLMALIVPCLPDGISPGECSVLASADLLGDCLM 745
            M GGDG +SY  NS +Q   ++ AK   +  I   LDL  +  +S   +  IAD GCS+GPNTF  VQNIID+VK K      +Y    LEFQV FND  +NDFN L+++ P  S + Y + GVPGSFH R+ PK S++  H +Y L WLS+ P+ + D+ SPA NK  I  +    EV EAY  +  K +  FL ARA+EL SGGLM L   CLPDG+           D++GDCLM
Sbjct:   10 MNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFGCSIGPNTFEVVQNIIDTVKQKNLKENNAYIGAPLEFQVCFNDQPNNDFNTLFRTQPISSKQAYLSVGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILSGQCLPDGVPKALTWQGVVIDMIGDCLM 247          
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.607e-48
Identity = 109/245 (44.49%), Postives = 142/245 (57.96%), Query Frame = 2
Query:   29 SESVSSQAMMGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRVASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVKLKCQSYGHDK----LEFQVFFNDLVSNDFNALYKSLP--SDRQYYAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTPKELNDQNSPAYNKGRIYYSRGPNEVVEAYSAESAKGIESFLLARAQELASGGLMALIVPCLPDGISPGECSVLASADLLGDCLM 745
            S S     M  G  Q+SY  NS +Q   + +A     R I +KLDL    SS    F IAD GCS+GPNTF+  Q+IID+VK K      +     LEFQVFFND  +NDFN L+++ P   +R+Y++ GVPGSF+ R+ P+ SI+  H SY   WLS  P  + D+ S A+NK  I  +    EV +AY  +  K +E FL ARA+EL  GGLM +I  CLPDG+S  E       D +GDCLM
Sbjct:    2 STSSHMYPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQ--LSSDFGTFRIADFGCSIGPNTFHVAQSIIDTVKSKRLEESTENSLVPLEFQVFFNDQPTNDFNTLFRTQPLSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVIGECLPDGVSLYETWQGYVMDTIGDCLM 244          
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.456e-28
Identity = 78/231 (33.77%), Postives = 117/231 (50.65%), Query Frame = 2
Query:   53 MMGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRVASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVKLKCQSYGHDKLEFQVFFNDLVSNDFNALYKSLPS--------DRQY-------------YAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTP-KELNDQNSPAY-----NKGRIYYSR-GPNEVVEAYSAESAKGIESFLLARAQELASGGLMAL 661
            M  G+G+ SYA+NS  QS+ +   +    RV+ + L    + +S    F IADLGCS GPN+  ++ NI+++++  C        E  +  NDL SNDFN ++ SLP         D  Y             + + VPGSF+ RLFP+ S++F H S  L WLS  P  E+N ++         N+G+IY S+  P    + Y+ +       FL +R++EL  GG M L
Sbjct:    9 MNKGNGETSYAKNSIVQSNIISLGR----RVMDEALKKLMIRNSEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVL 235          
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27
Identity = 80/227 (35.24%), Postives = 114/227 (50.22%), Query Frame = 2
Query:   53 MMGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRVASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVKLKCQSYGHDKLEFQVFFNDLVSNDFNALYKSLPS--DR----------------QYYAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTP-----KELNDQNSPAYNKGRIYYSR-GPNEVVEAYSAESAKGIESFLLARAQELASGGLMAL 661
            M  G+G+ SYA+NS  QS+ +   +    RV+ + L    +++S      IADLGCS GPN+  ++ NI+D++   C        E +V  NDL SNDFN +  SLP   DR                  + + VPGSF+ RLFP+ S++F H S  L WLS  P     KE     +   N G+IY S+  P    +AY+ +       FL +R++EL  GG M L
Sbjct:    9 MNKGNGETSYAKNSTAQSNIISLGR----RVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLENMGKIYISKTSPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVL 231          
BLAST of FC923658 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 71/205 (34.63%), Postives = 111/205 (54.15%), Query Frame = 2
Query:   56 MGGDGQYSYARNSEFQSHGVETAKAIINRVISDKLDLNRVASSSSKVFSIADLGCSVGPNTFNAVQNIIDSVK-LKCQSYGHDKLEFQVFFNDLVSNDFNALYKSLPSDR-QYYAAGVPGSFHNRLFPKASINFFHCSYGLQWLSSTPKELNDQNSPAYNKGRIYY-SRGPNEVVEAYSAESAKGIESFLLARAQELASGGLMAL 661
            + GDG+ SYA NS  Q   +  +  +++  + D +  +       K F + D+GCS GPN    +  II++++ L  +   ++  EF+VF NDL  NDFN L+K L  +    +  G+PGSF+ RL PK S++F + SY + WLS  P+ L D      N+  IY  +  P EV +AY+ +  +   +FL  R +E+  GG M L
Sbjct:   12 IAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDH---VGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLLSHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDN-----NRQNIYMATESPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVL 208          
The following BLAST results are available for this feature:
BLAST of FC923658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MT797_ARATH2.068e-5045.80Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH2.701e-5044.90Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH1.341e-4945.80Probable S-adenosylmethionine-dependent methyltran... [more]
MT810_ARATH9.607e-4844.49Probable S-adenosylmethionine-dependent methyltran... [more]
JMT_BRARP8.456e-2833.77Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH1.884e-2735.24Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA5.481e-2734.63Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
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Properties
Property NameValue
Genbank descriptionC31707E11EF StrClemenN Citrus clementina cDNA clone C31707E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923658 ID=FC923658; Name=FC923658; organism=Citrus clementina; type=EST; length=745bp
GAACCCCAGAGAATAGAAAGATATGGCCTCTGAATCTGTTTCATCGCAAG
CAATGATGGGAGGAGATGGGCAGTACAGTTACGCGCGCAATTCTGAGTTT
CAGAGCCACGGAGTGGAAACAGCCAAAGCCATAATCAACCGGGTGATTTC
TGATAAGCTTGATTTAAATCGAGTCGCGTCTTCTTCTTCAAAAGTATTTT
CCATTGCGGATTTAGGATGTTCTGTTGGGCCAAACACATTCAACGCTGTA
CAAAACATAATAGATTCTGTGAAACTCAAGTGCCAAAGCTATGGCCATGA
TAAACTTGAATTTCAAGTGTTCTTTAATGACCTTGTCTCAAACGATTTCA
ACGCCCTTTACAAGTCTCTTCCTTCCGATCGACAATACTATGCAGCCGGC
GTACCGGGTTCTTTTCACAATCGGTTATTTCCCAAGGCTTCAATCAATTT
CTTCCACTGCTCATACGGCCTTCAGTGGCTCTCAAGCACGCCAAAAGAGT
TGAATGACCAGAACTCACCTGCCTACAACAAGGGGAGGATTTATTACAGC
AGAGGCCCAAATGAAGTTGTAGAAGCATACTCAGCTGAATCTGCCAAGGG
AATTGAGTCCTTTTTACTAGCCAGGGCACAAGAGCTCGCTTCCGGAGGGC
TAATGGCTCTTATTGTACCATGTCTGCCGGATGGGATTTCCCCTGGAGAG
TGCTCTGTCTTAGCTTCTGCTGATCTACTGGGAGACTGTCTTATG
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