FC923670

Overview
NameFC923670
Unique NameFC923670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14517 contig Ccv1_Contig14517:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_ARATH (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.046e-71
Identity = 139/193 (72.02%), Postives = 158/193 (81.87%), Query Frame = 2
Query:  155 MAVRVVTRNLGXXXXXXXXXXXXXXXHATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQD-KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            MA+R V+R LG               HATSFGF+EV  EEKS+LV NVF++VA +YD+MND+MSGGLHRLWK+RLV KL+PF GMKHLDVAGGTGDVAFRI D V S+KRRALQ V E  L EET+IYVCDINPNMLNVGK+RA ERG +D KSL+WVEGDAEAL F+D++MDGYTIAFGIRNVTHIEKALAE
Sbjct:    1 MALRSVSRRLGSRILNQRSFVASLHSHATSFGFQEVKEEEKSKLVGNVFTNVASSYDIMNDVMSGGLHRLWKERLVGKLSPFAGMKHLDVAGGTGDVAFRIYDAVYSVKRRALQKVDEASL-EETQIYVCDINPNMLNVGKQRAAERGLRDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALAE 192          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_ORYSJ (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.915e-69
Identity = 128/167 (76.65%), Postives = 147/167 (88.02%), Query Frame = 2
Query:  233 HATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQD-KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            HATSFG+K+V  E+KS+LV NVFSSVA +YDLMNDLMS GLHRLWKDRL+SKLNPFPGMKHLDVAGGTGDVAFR L+ +NS+  RA+Q  L  D++EET+IYVCDINPNMLNVGKKRA ERGY++   L W++GDAEAL FED +MDGYTIAFGIRNVTHIEKAL+E
Sbjct:   33 HATSFGYKQVAEEDKSKLVGNVFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQGTL-TDIEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSE 198          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_HUMAN (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Homo sapiens GN=COQ5 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.584e-42
Identity = 94/181 (51.93%), Postives = 121/181 (66.85%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKR-------RALQDVLEDDLQEE----------TRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FGF+ V  EEK   V  VF SVAK YD+MND+MS G+HR+WKD L+ K++P PG + LDVAGGTGD+AFR L+ V S  +       RA Q++  +++ +E          +R+ VCDIN  ML VGK++AL +GY+   L WV GDAE L F+D   D YTIAFGIRNVTHI++AL E
Sbjct:   52 THFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKALAQGYR-AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQE 231          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_DANRE (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Danio rerio GN=coq5 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.095e-40
Identity = 92/182 (50.55%), Postives = 115/182 (63.19%), Query Frame = 2
Query:  236 ATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR-----------------ALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            +T FGF+ VP EEK++ V  VF SVAK YD+MND MS G+HRLWKD L+  +NP PG++ LD AGGTGD++FR L+   S+  R                 A   V +++   ++R  VCDIN  ML VGK+RA + G     L WV GDAE L F+D   D YTIAFGIRNVTHIE+AL E
Sbjct:   51 STHFGFQTVPEEEKAEKVYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGI-TTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQE 231          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_BOVIN (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Bos taurus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.095e-40
Identity = 90/181 (49.72%), Postives = 116/181 (64.09%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL-----------------EDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FGF+ V  EEK   V  VF SVAK YD+MND+MS G+HR+WKD L+ K+ PFPG + LDVAGGTGD+AFR L+ V +  +R  +  L                 E+D    + + VCDIN  ML +GK++A  +GY+   L W+ GDAE L F+D+  D YTIAFGIRNVTHI++AL E
Sbjct:   52 THFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPFPGTQLLDVAGGTGDIAFRFLNYVQAQHQRKQKRQLRAQQNLSWEEIARKYQNEEDSLGGSHVMVCDINKEMLKIGKQKARAQGYK-AGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHIDQALQE 231          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_PONAB (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Pongo abelii GN=COQ5 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40
Identity = 92/181 (50.83%), Postives = 119/181 (65.75%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKR-------RALQDVLEDDLQEE----------TRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FG + V  EEK   V  VF SVAK YD+MND+MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L+ V S  +       RA Q++  +++ +E          +R+ +CDIN  ML VGK++AL +GY+   L WV GDAE L F+D   D YTIAFGIRNVTHI++AL E
Sbjct:   52 THFGSETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVMCDINKEMLKVGKQKALAQGYR-AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQE 231          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_RAT (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Rattus norvegicus GN=Coq5 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.581e-39
Identity = 93/181 (51.38%), Postives = 113/181 (62.43%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNS----IKRRALQDVLEDDLQEETRIY-------------VCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FGF+ V  +EK   V  VF SVA+ YDLMND+MS G+HR WKD L+ K++P PG + LDVAGGTGD+AFR L  V +     +RR L+       +E  R Y             VCDIN  ML VGK++AL RG+    L WV GDAE L F+D   D YTIAFGIRNVTHI++AL E
Sbjct:   52 THFGFETVSEKEKGGKVYQVFQSVARKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDVAGGTGDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGGSLVMVCDINREMLKVGKQKALARGH-TAGLAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQE 231          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_MOUSE (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Mus musculus GN=Coq5 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 89/181 (49.17%), Postives = 113/181 (62.43%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL-----------------EDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FGF+ V   EK   V  VF +VAK YDLMND+MS G+HR WKD L+ K++P PG + LD+AGGTGD+AFR L  V +  +R  +  L                 E+D    +   VCDIN  ML VGK++AL++G+    L WV GDAE L F+D + D YTIAFGIRNVTHI++AL E
Sbjct:   52 THFGFETVSEGEKGSKVYQVFENVAKKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDMAGGTGDIAFRFLSYVQAQHQRRQRRQLRTQQNLSWEEIAKKYQNEEDSLGGSLATVCDINREMLKVGKQKALDQGH-TAGLAWVLGDAEELPFDDDSFDVYTIAFGIRNVTHIDQALQE 231          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_DICDI (Ubiquinone biosynthesis methyltransferase coq5, mitochondrial OS=Dictyostelium discoideum GN=coq5 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.748e-38
Identity = 83/177 (46.89%), Postives = 114/177 (64.41%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILD----------TVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDK---SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FGFK V  E+K  +V +VF SV+ +YDLMND+MS G+HRLWKD L++ LNP PG   LDVAGGTGD++FR LD           +N       + +    L     ++  DIN +MLN GKKR L +GY D+   S+ WV+G++E L F+D+T + YT++FGIRN T+I++ L E
Sbjct:   44 THFGFKTVNKEDKESMVKDVFDSVSSSYDLMNDVMSMGIHRLWKDELINTLNPTPGSHLLDVAGGTGDISFRFLDKIKTSPNYFPNINKSNNGGGEVLKSSSLPSSATVF--DINQSMLNEGKKRGLNKGYTDQSDPSIDWVQGNSEQLPFKDNTFNCYTVSFGIRNCTNIDQVLRE 218          
BLAST of FC923670 vs. ExPASy Swiss-Prot
Match: COQ5_CHICK (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Gallus gallus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.982e-38
Identity = 88/182 (48.35%), Postives = 112/182 (61.54%), Query Frame = 2
Query:  239 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL-----------EDDLQEE-------TRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAE 730
            T FGF+ V   E+ + +  VF +VA+ YD+MND MS G+HR+WKD LV K+NP PG   +DVAGGTGD+AFR L+ V S++ R LQ  L               QEE       +++ VCDIN  ML  GK++A   GY +  L WV G+AE L F+D   D YTIAFGIRNVT I+ AL E
Sbjct:   35 THFGFQNVSEAERREKIYQVFENVAEKYDVMNDSMSLGIHRVWKDILVHKMNPSPGTLLVDVAGGTGDIAFRFLNYVRSVRERQLQQKLRHHQNLSWQEISKSYQEEKSNPLGDSQVVVCDINKEMLKAGKQKAQHLGYSE-GLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTRIDLALQE 215          
The following BLAST results are available for this feature:
BLAST of FC923670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 358
Match NameE-valueIdentityDescription
COQ5_ARATH2.046e-7172.02Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_ORYSJ1.915e-6976.65Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_HUMAN7.584e-4251.93Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_DANRE1.095e-4050.55Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_BOVIN1.095e-4049.72Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_PONAB1.868e-4050.83Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_RAT1.581e-3951.38Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_MOUSE6.009e-3949.17Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_DICDI1.748e-3846.89Ubiquinone biosynthesis methyltransferase coq5, mi... [more]
COQ5_CHICK2.982e-3848.35Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]

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Properties
Property NameValue
Genbank descriptionC31707F11EF StrClemenN Citrus clementina cDNA clone C31707F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923670 ID=FC923670; Name=FC923670; organism=Citrus clementina; type=EST; length=732bp
GAAACTCAGCAGCCTGCAATTTCACCGACCGAAGAACGAGGGAGAGTTGG
AGAAGCGAATATTATTAGAACAGAGAGTGTACAGTTTTATTGGGCGCCCG
TTACTGTTTCAAGGTTTTCAGCATCGATTGCATTGTTAGAAAGTTGTTGA
AGCCATGGCAGTGCGGGTGGTGACGAGGAATTTGGGGAGTAGACTCTTAC
CGATGCTCTCTTCCACTTCTTTACTGCATTCACATGCTACAAGCTTCGGG
TTCAAAGAAGTACCGGCAGAAGAAAAAAGTCAATTGGTTAGCAATGTTTT
CAGCAGTGTTGCTAAAAACTATGATCTCATGAATGATTTGATGAGTGGTG
GATTGCATAGATTGTGGAAGGATAGACTTGTTTCCAAGTTGAATCCATTT
CCGGGAATGAAGCACCTTGATGTTGCTGGTGGAACAGGGGATGTTGCTTT
CAGGATTTTAGACACTGTAAATAGCATCAAACGAAGAGCACTCCAGGATG
TTCTTGAAGATGATTTACAGGAGGAAACTCGGATATATGTTTGTGACATC
AACCCAAACATGCTAAATGTTGGTAAAAAGCGTGCTTTAGAGAGAGGTTA
CCAGGACAAATCACTTTTGTGGGTGGAAGGAGATGCAGAAGCCTTGTGCT
TTGAGGACAGTACTATGGATGGTTACACAATTGCCTTCGGAATTAGGAAT
GTTACTCATATTGAGAAGGCTCTAGCTGAAGC
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