FC923676

Overview
NameFC923676
Unique NameFC923676
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14501 contig Ccv1_Contig14501:9..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: AGUB_SOLTU (N-carbamoylputrescine amidase OS=Solanum tuberosum GN=CPA PE=2 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 9.604e-127
Identity = 216/238 (90.76%), Postives = 227/238 (95.38%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E FF RAKPY  HPTI++MQ LAKELGVVIPVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTK+AKIGVAICWDQWFPEAARAM LQGAE+LFYPTAIGSEPQDDGLDSRDHWRRVMQGHAG NVVPLVASNRIGKEIIET+HG S+ITFYG SFIA PTGE
Sbjct:   10 VAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFFHRAKPYLGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKYAKIGVAICWDQWFPEAARAMALQGAEVLFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGNSEITFYGYSFIAGPTGE 247          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: AGUB_SOLLC (N-carbamoylputrescine amidase OS=Solanum lycopersicum GN=CPA PE=2 SV=1)

HSP 1 Score: 451.825 bits (1161), Expect = 1.638e-126
Identity = 215/238 (90.34%), Postives = 227/238 (95.38%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E FF RAKPY  HPTI++MQ LAKELGVVIPVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHIPDGPGYQEK+YFNPGDTGFKVFQTK+AKIGVAICWDQWFPEAARAM LQGAE+LFYPTAIGSEPQDDGLDSRDHWRRVMQGHAG NVVPLVASNRIGKEIIET+HG S+ITFYG SFIA PTGE
Sbjct:   10 VAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFFHRAKPYPGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKYYFNPGDTGFKVFQTKYAKIGVAICWDQWFPEAARAMALQGAEVLFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGNSEITFYGYSFIAGPTGE 247          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: AGUB_ARATH (N-carbamoylputrescine amidase OS=Arabidopsis thaliana GN=CPA PE=1 SV=1)

HSP 1 Score: 436.802 bits (1122), Expect = 5.454e-122
Identity = 216/265 (81.51%), Postives = 227/265 (85.66%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAER---------------------------LVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            VS+LQFAC+DD+STN+A AER                           LVR AH KGANIILIQELFEGYYFCQAQRE FF+RAKPYK+HPTI +MQ+LAKELGVVIPVSFFEEAN AHYNSIAIIDADG+DLG+YRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQD GLDSRDHWRRVMQGHAG NVVPLVASNRIGKEIIET+HG SQITFYG SFIA PTGE
Sbjct:   12 VSSLQFACSDDISTNVAAAERFVSLSSSLPLSNYQSLPSSSSFKFPYALVREAHAKGANIILIQELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIPVSFFEEANTAHYNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDQGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGPSQITFYGTSFIAGPTGE 276          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: AGUB_ORYSJ (N-carbamoylputrescine amidase OS=Oryza sativa subsp. japonica GN=CPA PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 8.433e-115
Identity = 194/238 (81.51%), Postives = 217/238 (91.18%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            V+A+QFACTD  S N+ TAERL+R AH KGANI+L+QELFEG YFCQAQR  FFQRAKPYK +PTI++ Q+LAKEL VVIPVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHIPDGPGYQEKFYFNPGDTGFK F+TK+A IGV ICWDQWFPE ARAMVLQGAEILFYPTAIGSEPQD+ LDSR+HW+RVMQGHAG N+VPLVASNRIG+E +ET+HG+S ITF+GNSFIA PTGE
Sbjct:   13 VAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPTGE 250          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: YCU9_SCHPO (Probable nitrilase C965.09 OS=Schizosaccharomyces pombe GN=SPCC965.09 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.379e-22
Identity = 79/233 (33.91%), Postives = 110/233 (47.21%), Query Frame = 3
Query:   33 DVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSF---FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            DV  NL      V          N+IL  EL    Y C      F Q A+   + P+   M  LA +  V I   F    E+ +N  YNS   I  +G+  G+YRK H+ D     E+ +F  G + F +F+T F K+GV ICWD  FPE AR   L GA++L   T   +   DD       W  V +  A  N +PLVA+NR+G +         +++F+G+S I  PTG+
Sbjct:   16 DVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECG---NTFTQIAEIAGEGPSFKTMSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHLFD----TERKHFKKG-SDFPIFETSFGKLGVMICWDTAFPEVARIHALNGADLLVVATNWENPYSDD-------WDLVTKARAFENCIPLVAANRVGTD--------EKLSFFGHSKIIGPTGK 225          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: DCAS_AGRSK (N-carbamoyl-D-amino acid hydrolase OS=Agrobacterium sp. (strain KNK712) PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.132e-18
Identity = 76/239 (31.80%), Postives = 111/239 (46.44%), Query Frame = 3
Query:   66 LVRAAHGKGANIILIQEL-----FEGYYFC-QAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSF----FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ--------EKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILF----YPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            ++  A  +GAN I+  EL     F  ++F  +A+ + F++   P    P +  + E A ELG+   + +     E      +N+  ++D  G  +G YRK H+P    Y+        EK YF PGD GF V+    AK+G+ IC D+ +PEA R M L+GAEI+      PT     PQ D L S  H    MQ  +  N     A+ ++G E              G+S I  PTGE
Sbjct:   31 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMP---GPVVRPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFICNDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLS-MQAGSYQNGAWSAAAGKVGME--------ENCMLLGHSCIVAPTGE 257          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2B_XENLA (Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 75/244 (30.74%), Postives = 116/244 (47.54%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            +S +QF  +   S NL  A +L++ A  KGA I+ + E F   Y      + F + A+      T L + ++AKE G+ +I  S  EE +   YN+ A+   DG+ L  +RK H+   D PG   +QE    +PGD+ F VF T + K+GV IC+D  F E A+    +G ++L YP A              HW  + +  A  N V +  ++    E       K+    +G+S +  P GE
Sbjct:    6 LSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPY----GTKYFPEYAEKIPGESTEL-LSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDS-FSVFDTPYCKVGVGICYDMRFAELAQIYANKGCQLLVYPGAFNM------TTGPAHWELLQRARALDNQVYVATASPARDE-------KASYVAWGHSTVVSPWGE 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: BUP1_PONAB (Beta-ureidopropionase OS=Pongo abelii GN=UPB1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 73/245 (29.80%), Postives = 111/245 (45.31%), Query Frame = 3
Query:   30 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQIT-------------FYGNSFIAXPTG 713
            + VS      + +V  A   G NII  QE +   + FC  ++  + + A+  +D PT    Q+LAK   +V+     E   E  +  +N+  +I   G+ LG  RK+HIP    + E  Y+  G+ G  VFQT+F +I V IC+ +  P       + GAEI+F P+A        G  S   W    +  A  N     A NR+G     T+H  ++ T             FYG+S++A P G
Sbjct:   91 EQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSA------TIGALSESLWSIEARNAAIANHCFTCAINRVG-----TEHFPNEFTSGDGKKAHQDFGYFYGSSYVAAPDG 324          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2_XENTR (Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 75/244 (30.74%), Postives = 117/244 (47.95%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            +S +QF  +   S NL  A +L++ A  KGA I+ + E F   Y      + F + A+      T  ++ ++AKE G+ +I  S  EE +   YN+ A+   DG+ L  +RK H+   D PG   +QE    +PGD+ F VF+T + K+GV IC+D  F E A+    +G ++L YP A              HW  + +  A  N V +  ++    E       K+    +G+S I  P GE
Sbjct:    6 LSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPY----GTKYFPEYAEKIPGESTE-RLSQVAKECGIYLIGGSIPEEDSGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDS-FSVFETPYCKVGVGICYDIRFAELAQLYSKKGCQLLVYPGAFNM------TTGPAHWELLQRARALDNQVYVATASPARDE-------KASYVAWGHSTIVSPWGE 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: DCAS_RHIRD (N-carbamoyl-D-amino acid hydrolase OS=Rhizobium radiobacter PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 74/235 (31.49%), Postives = 107/235 (45.53%), Query Frame = 3
Query:   78 AHGKGANIILIQEL-----FEGYYFC-QAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSF----FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ--------EKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILF----YPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            A  +G N I+  EL     F  ++F  +A+ + F++   P    P +  + E A ELG+   + +     E      +N+  ++D  G  +G YRK H+P    Y+        EK YF PGD GF V+    AK+G+ IC D+ +PE  R M L+GAEI+      PT     PQ D L S  H    MQ  +  N     A+ ++G E              G+S I  PTGE
Sbjct:   35 AASRGVNFIVFPELALTTFFPRWHFTDEAELDSFYETEMP---GPVVRPLFETAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFICNDRRWPETWRVMGLKGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLS-MQAGSYQNGAWSAAAGKVGME--------EGCMLLGHSCIVAPTGE 257          
The following BLAST results are available for this feature:
BLAST of FC923676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
AGUB_SOLTU9.604e-12790.76N-carbamoylputrescine amidase OS=Solanum tuberosum... [more]
AGUB_SOLLC1.638e-12690.34N-carbamoylputrescine amidase OS=Solanum lycopersi... [more]
AGUB_ARATH5.454e-12281.51N-carbamoylputrescine amidase OS=Arabidopsis thali... [more]
AGUB_ORYSJ8.433e-11581.51N-carbamoylputrescine amidase OS=Oryza sativa subs... [more]
YCU9_SCHPO8.379e-2233.91Probable nitrilase C965.09 OS=Schizosaccharomyces ... [more]
DCAS_AGRSK1.132e-1831.80N-carbamoyl-D-amino acid hydrolase OS=Agrobacteriu... [more]
NIT2B_XENLA3.295e-1830.74Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE... [more]
BUP1_PONAB9.587e-1829.80Beta-ureidopropionase OS=Pongo abelii GN=UPB1 PE=2... [more]
NIT2_XENTR1.252e-1730.74Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 P... [more]
DCAS_RHIRD1.635e-1731.49N-carbamoyl-D-amino acid hydrolase OS=Rhizobium ra... [more]

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Properties
Property NameValue
Genbank descriptionC31707G05EF StrClemenN Citrus clementina cDNA clone C31707G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923676 ID=FC923676; Name=FC923676; organism=Citrus clementina; type=EST; length=717bp
GGGTGTCAGCTCTGCAATTCGCTTGCACCGACGATGTCTCTACTAATCTT
GCCACCGCTGAAAGGCTGGTCAGAGCTGCTCATGGAAAAGGTGCAAACAT
AATTCTTATTCAGGAACTCTTTGAGGGTTATTATTTCTGTCAAGCACAAA
GAGAGGTCTTCTTTCAGCGTGCTAAGCCATATAAGGACCATCCCACAATT
CTCAAGATGCAGGAGCTTGCGAAAGAGCTAGGTGTAGTGATACCAGTTAG
CTTCTTTGAAGAGGCCAATAATGCCCATTACAATTCAATAGCGATCATTG
ATGCTGATGGATCTGATCTTGGACTCTACAGGAAGTCCCATATCCCAGAT
GGACCAGGCTATCAGGAAAAGTTCTACTTCAATCCAGGGGACACTGGCTT
CAAGGTTTTCCAAACTAAATTTGCAAAAATTGGAGTTGCAATATGCTGGG
ATCAGTGGTTTCCAGAGGCAGCTCGGGCTATGGTTTTACAAGGTGCTGAG
ATATTGTTTTACCCTACTGCTATTGGTTCTGAACCTCAAGATGATGGACT
TGATTCTCGTGATCACTGGAGGCGAGTGATGCAAGGGCATGCTGGGACTA
ATGTAGTACCTCTAGTTGCTTCGAATCGCATTGGGAAAGAAATAATTGAG
ACACAGCACGGAAAGAGTCAAATCACATTCTACGGGAACTCCTTTATTGC
ANGCCCAACCGGGGAGA
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