FC923691
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.626e-28 Identity = 67/187 (35.83%), Postives = 112/187 (59.89%), Query Frame = 3 Query: 177 MFDHHQWGVAFGILGNIISFLVYLAPVPTFYRIYRKKSTESFQSLPYLVALFSSMLWFYYAL--VKQNAFLLVTINYFGCVIETIYIILFITY-APKGSRNSTVKLFVSMNVGVFSLILLLTHF-LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGL 725 M D Q G++GN+ISF ++ AP TF+RI++KKS E F +PY+ + + MLW +Y L V +++ L+ TIN G VIE Y+ +++ Y K + + F+++ V + I+L+T F L D + +G IC +++++ AP + +V++TKSVE+MPF+LS ++A +W Y L Sbjct: 1 MVDAKQVRFIIGVIGNVISFGLFAAPAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSL 187
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 43/147 (29.25%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 282 KKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINYFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYG 722 K+S E+ Q LP+L +++ WFYY +K + L++ +N G ++T+Y+ +I Y+ + R ++ VS+ V +F T + ++R+ LG C ++S++ +PL+ +AQ+I++KS + + F L+ L++ W YG Sbjct: 32 KRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLII-VNLIGASLQTLYMAAYILYSLE-RRYVVSQVLVSLGV-LFLAHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYG 175
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 44/153 (28.76%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 282 KKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINYFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLL-----THFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGL 725 ++S E+ Q LP+L +++ WFYY +K + L++ +N G ++++Y+ ++ Y+P+ + +V V V +LLL T ++ ++R+ LG C ++S++ +PL+ +AQ+IR+KS + + F L+ L++ W YGL Sbjct: 32 QRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPE-------RRYVGSQVLVSLGVLLLGYCYFTLWILDLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGL 176
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: R1AP1_PAPAN (RAG1-activating protein 1 OS=Papio anubis GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12 Identity = 43/149 (28.86%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 285 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINYFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYG 722 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ +LG C ++S++ +PL+ +A+VI+TKS + + + L+ L++ W YG Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDRILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQLLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATVLTSASWCLYG 179
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 41/150 (27.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 279 RKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINYFGCVIETIYIILFITYAPK--GSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYG 722 R +S ++ Q LP+L +++ W Y ++K + L++ +N G V++T+YI+ ++ Y+P+ G T L + +G LL+ A R+ LG C ++S++ +PL+ +A++++TKS + + F L+ + W YG Sbjct: 35 RTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVPDLEA----RLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYG 179
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12 Identity = 43/149 (28.86%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 285 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINYFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYG 722 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ LG C ++S++ +PL+ +A+VI+TKS + + + L+ L++ W YG Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYG 179
BLAST of FC923691 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 41/151 (27.15%), Postives = 78/151 (51.66%), Query Frame = 3 Query: 285 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINYFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGV----FSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGL 725 +S ++ Q LP+L +++ W YY L+K + ++ +N G ++T+YI + Y + R T L + + V FSL++ + ++ LG C ++S++ +PL+ + ++RTKSVE + F L+ ++ W YGL Sbjct: 33 QSADNVQFLPFLTTCLNNLGWLYYGLLKGDG-TVIFVNIIGAFLQTVYIATYCHYTKEKRRVYTQTLLMVSVLCVAWVYFSLVI------SPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGL 176 The following BLAST results are available for this feature:
BLAST of FC923691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923691 ID=FC923691; Name=FC923691; organism=Citrus clementina; type=EST; length=728bpback to top |