FC923700

Overview
NameFC923700
Unique NameFC923700
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923700 vs. ExPASy Swiss-Prot
Match: Y1222_ARATH (Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.021e-43
Identity = 84/165 (50.91%), Postives = 116/165 (70.30%), Query Frame = 3 
Query:  234 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRPSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTXGGMKLPL 725
            SE+++VLGGNGFVGS IC+ A+  G+ V S+SRSGRP+  DSW + V W  G++    +W E L G TAV+S +GGFG+   M +ING AN+ A+ AA + GV +FV I+  D+ +  ++L  GY+ GKR AE ELL++YP  GV+LRPGFIYG R   G+++PL
Sbjct:   62 SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYL-NWDEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFILSNGYFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPL 225
The following BLAST results are available for this feature:
BLAST of FC923700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1222_ARATH4.021e-4350.91Uncharacterized protein At1g32220, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionC31708A06EF StrClemenN Citrus clementina cDNA clone C31708A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923700 ID=FC923700; Name=FC923700; organism=Citrus clementina; type=EST; length=731bp
GAGCTTCGGAGAAAATTGACAGAGAAACAGTAATACTGTAGAAGTATAGT
GAATAGAGCTATCATCAAATGAGGACCATCGTTTCACGCTTGATCAATTC
AAGATCATCAGTCTCTAGACTCTCTGCAATTACAGCGTCGGGGAACGGGA
GATATCTGTCAACAGATTCTAATAAGGTTGATGAACCCTTAAAAGTTGAG
GAAGCAGAGACAGTAAATGTGCCCCCGCCTCCAAGTGAAAAGTTGCTTGT
TTTAGGTGGAAATGGATTTGTTGGATCGCACATTTGCAGAGAAGCTCTCG
ACCGTGGTTTGACTGTTGCCAGCCTTAGCAGGTCCGGTCGGCCATCTTTA
CGTGATTCTTGGGCAAATAATGTGATTTGGCATCAAGGAAATCTTCTTTC
ATCTGATTCATGGAAGGAAGCTTTGGATGGGGTGACAGCTGTTATCTCCT
GTGTTGGAGGTTTTGGGTCCAACTCTTACATGTATAAGATTAATGGGACT
GCAAACATCAATGCAATCAGAGCTGCTTCAGAAAAAGGTGTGAAAAGATT
TGTTTATATCTCTGCTGCTGACTTTGGTGTGGCAAATTACTTACTGCAAG
GATATTACGAGGGAAAGAGAGCTGCTGAGACAGAGTTACTGACCAGATAC
CCTTATGGAGGAGTGATTTTAAGGCCGGGGTTTATATATGGAACTCGAAC
TGNTGGGGGCATGAAGCTACCTCTTGGCGTG
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