FC923704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923704 vs. ExPASy Swiss-Prot
Match: SYP71_ARATH (Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.814e-70 Identity = 142/229 (62.01%), Postives = 165/229 (72.05%), Query Frame = 3 Query: 9 MSVIDLITRVDAICXXXXXXXXXXXXELNVYGDDAFARLYGVVQADLDAALQKSEAAATEKNRATAVAMNAEIRRTKARLLEEVAKLQRLAFKKVKGLSKEELEARSDLVAALKDRIEGIPD--XXXXXXXXXXXXXXXXXXXXIKFDTYSGGKFDDEYFQETEESSGFRQEYEMRRMKQDQGLDVIGEGLDTLKNMAHDMNEEIDRQVPMMDEIDEKVDRATSDLKST 689 M+VID++TRVD+IC E N+ GDDAFARLYG + ++ AL+K+E EKNRA AVAMNAEIRRTKARL EEV KLQRLA K+VKGL+ EEL AR+DLV AL RIE IPD IKFD S G+FDD+YFQE+ ESS FRQEYEMR++KQ+QGLD+I EGLD LKNMA DMNEE+DRQVP+MDEID KVDRATSDLK+T Sbjct: 1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKEKNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAIPDGTAGGPKSTSAWTPSSTTSRPDIKFD--SDGRFDDDYFQESNESSQFRQEYEMRKIKQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNT 227 HSP 2 Score: 25.0238 bits (53), Expect = 1.814e-70 Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 689 HVRLKXYSTQLRSSRNF 739 +VRLK QLRSSRNF Sbjct: 228 NVRLKDTVNQLRSSRNF 244
BLAST of FC923704 vs. ExPASy Swiss-Prot
Match: SYP72_ARATH (Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.150e-63 Identity = 128/229 (55.90%), Postives = 161/229 (70.31%), Query Frame = 3 Query: 9 MSVIDLITRVDAICXXXXXXXXXXXXELNVYGDDAFARLYGVVQADLDAALQKSEAAATEKNRATAVAMNAEIRRTKARLLEEVAKLQRLAFKKVKGLSKEELEARSDLVAALKDRIEGIPD--XXXXXXXXXXXXXXXXXXXXIKFDTYSGGKFDDEYFQETEESSGFRQEYEMRRMKQDQGLDVIGEGLDTLKNMAHDMNEEIDRQVPMMDEIDEKVDRATSDLKST 689 M VID+I RVD IC E+ GDDAF+RL+ + +D++A L+K+E A+TEKNRA AVAMNAE+RRTKARL E+V KLQ+LA KK+KGL++EE E+R DLV AL DR++ IPD IKFD S DD +FQ++EESS FRQEYEMRR KQD+GLD+I EGLD LKN+A DMNEE+D+QVP+M+E++ KVD ATSDLK+T Sbjct: 1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFD-MSEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNT 228 HSP 2 Score: 24.6386 bits (52), Expect = 1.150e-63 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 689 HVRLKXYSTQLRSSRNF 739 +VRLK Q+RSSRNF Sbjct: 229 NVRLKKQLVQMRSSRNF 245
BLAST of FC923704 vs. ExPASy Swiss-Prot
Match: SYP73_ARATH (Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.724e-62 Identity = 130/228 (57.02%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 9 MSVIDLITRVDAICXXXXXXXXXXXXELNVYGDDAFARLYGVVQADLDAALQKSEAAATEKNRATAVAMNAEIRRTKARLLEEVAKLQRLAFKKVKGLSKEELEARSDLVAALKDRIEGIPDXXXXXXXXXXXXXXXXXXXXIKFDT-YSGGKFDDEYFQETEESSGFRQEYEMRRMKQDQGLDVIGEGLDTLKNMAHDMNEEIDRQVPMMDEIDEKVDRATSDLKST 689 M VIDLITRVD+IC + NV GDDAF+RLY V+ L+ LQK+E ++E N+A AVAMNAEIRRTKARLLE + KLQRL+ KKVKGLSKEEL+AR+DLV +L+D+IE IP+ I+FDT S + EYFQ T ES F+QEYEM+R+KQ + LD I EGLDTLKNMA D+NEE+DRQ P+MDEID K+D+A +DLKST Sbjct: 1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPE---SSAPVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQAR-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKST 224 HSP 2 Score: 25.409 bits (54), Expect = 4.724e-62 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 689 HVRLKXYSTQLRSSRNF 739 +VRLK T+LRSSRNF Sbjct: 225 NVRLKDTVTKLRSSRNF 241 The following BLAST results are available for this feature:
BLAST of FC923704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923704 ID=FC923704; Name=FC923704; organism=Citrus clementina; type=EST; length=778bpback to top |