FC923706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAEB_NICSY (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris GN=PSAEB PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.480e-23 Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 165 ++LR+ESYWY G+GSVVAVDQDP +RYPVVVRFNKVNYANVSTNNYALDE+EEVK Sbjct: 89 RVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVK 143
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE_SPIOL (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea GN=PSAE-1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.444e-22 Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 162 +I+R+ESYWY G+GSVVAVDQDPK+RYPVVVRFNKVNYANVSTNNYALDEI+EV Sbjct: 71 RIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQEV 124
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE2_ARATH (Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thaliana GN=PSAE2 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.216e-22 Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 165 KILR+ESYWY +GSVVAVDQDPK+RYPVVVRF KVNYAN+STNNYALDE+EEVK Sbjct: 91 KILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAEA_NICSY (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris GN=PSAEA PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.200e-22 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 165 +ILR+ESYWY G GSVVA DQDP +RYPVVVRFNKVNYANVSTNNYALDEIEEVK Sbjct: 87 RILRKESYWYKGTGSVVACDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 141
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE1_ARATH (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana GN=PSAE1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 162 KILRRESYW+ +GSVVAVDQDPK+RYPVVVRF KVNYAN+STNNYALDE+EEV Sbjct: 88 KILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE_HORVU (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare GN=PSAE PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.065e-21 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 162 KILRRESYWYNG GSVV VDQDP +RYPVVVRF KVNYA VSTNNYALDEI+EV Sbjct: 92 KILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEV 145
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE_THEEB (Photosystem I reaction center subunit IV OS=Thermosynechococcus elongatus (strain BP-1) GN=psaE PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13 Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 162 KILR ESYWYN +G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL E++EV Sbjct: 9 KILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE_SYNEN (Photosystem I reaction center subunit IV OS=Synechococcus elongatus naegeli GN=psaE PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13 Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 162 KILR ESYWYN +G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL E++EV Sbjct: 9 KILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE_GLOVI (Photosystem I reaction center subunit IV OS=Gloeobacter violaceus GN=psaE PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.729e-13 Identity = 30/55 (54.55%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 165 +ILR+ESYWY +G+V +VD+ K+ YPV VRF KVNY+ ++TNN+ + E+EEV+ Sbjct: 10 RILRKESYWYREVGTVASVDKSEKTIYPVTVRFEKVNYSGINTNNFGVSELEEVE 64
BLAST of FC923706 vs. ExPASy Swiss-Prot
Match: PSAE_CYAPA (Photosystem I reaction center subunit IV OS=Cyanophora paradoxa GN=psaE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.655e-13 Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 Query: 1 KILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 165 +ILR+ESYWY IG+V ++DQ +YPV+VRF KVNY+NV++NN++LDE+ EV+ Sbjct: 9 RILRKESYWYQEIGTVASIDQSG-IKYPVIVRFEKVNYSNVNSNNFSLDEVVEVE 62 The following BLAST results are available for this feature:
BLAST of FC923706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923706 ID=FC923706; Name=FC923706; organism=Citrus clementina; type=EST; length=340bpback to top |