FC923718

Overview
NameFC923718
Unique NameFC923718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length577
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.194e-93
Identity = 167/191 (87.43%), Postives = 172/191 (90.05%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            KTNLCGKVR ATG GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV             SR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAA
Sbjct:  111 KTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAA 301          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.194e-93
Identity = 167/191 (87.43%), Postives = 172/191 (90.05%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            KTNLCGKVR ATG GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV             SR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAA
Sbjct:  111 KTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAA 301          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 1.725e-92
Identity = 162/191 (84.82%), Postives = 170/191 (89.01%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            KTNLCGKVR ATG G+MMNDRKSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVPTGLGAVWNTAKVEPGS VA+FGLGTV             SR+IGIDID KK++ AK FGV EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA
Sbjct:  109 KTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.460e-91
Identity = 165/191 (86.39%), Postives = 170/191 (89.01%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            KTNLCGKVR ATG GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNTAKVE GS+VAVFGLGTV             SRVIGIDID KKFD AKNFGVTEFVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALEC  KGWGTSVIVGVAA
Sbjct:  111 KTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAA 301          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 2.490e-91
Identity = 159/191 (83.25%), Postives = 169/191 (88.48%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            KTNLCGKVR ATG GVMM DRKSRFS+ GKPIYHFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA+FGLGTV             SR+IGIDID  K+D AKNFGVTEF+NPKDH+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHKGWGTSVIVGVAA
Sbjct:  108 KTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAA 298          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 9.209e-70
Identity = 124/190 (65.26%), Postives = 149/190 (78.42%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 572
            KTNLC K+R   G G ++ D+ SRF+  GK ++HFMGTSTFS+YTVV D+S+AK++ +AP+DKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             +R+IGID++P KF+ AK FG TEFVNPKDH KPIQ+VLV++TDGGVDYSFECIGNV +MRAALE CHKGWG SVI+GVA
Sbjct:  109 KTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVA 297          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 258.455 bits (659), Expect = 1.737e-68
Identity = 127/191 (66.49%), Postives = 146/191 (76.44%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            KTNLC K+R   G G +M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAA
Sbjct:  107 KTNLCQKIRVTQGKG-LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA 296          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 2.268e-68
Identity = 121/190 (63.68%), Postives = 147/190 (77.37%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 572
            KTNLC K+R   G G +M D  SRF+  GK ++HFMGTSTFS+YTVV D+S+A +DP+APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             +R+IG+DI+P+KF +A  FG TE +NPKDH +P+Q+VLV++TDGGVDYSFECIGNV +MR+ALE CHKGWG SVI+GVA
Sbjct:  108 KTNLCQKIRVTQGRG-LMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVA 296          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 3.275e-67
Identity = 127/190 (66.84%), Postives = 142/190 (74.74%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 572
            KTNLC K+R   G G +M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             SR+I +DI+  KF RAK FG TE +NP+D  KPIQ+VLV+ TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVA
Sbjct:  107 KTNLCQKIRVTQGKG-LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA 295          
BLAST of FC923718 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 3.275e-67
Identity = 125/191 (65.45%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 575
            +TNLC K+R   G G +M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCGV TG GA  NTAKVEPGS  A+FGLG V             SR+IG+DI+  KF +AK FG +E +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAA
Sbjct:  107 QTNLCQKIRTTQGKG-LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA 296          
The following BLAST results are available for this feature:
BLAST of FC923718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADHX_ORYSJ1.194e-9387.43Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI1.194e-9387.43Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH1.725e-9284.82Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_MAIZE1.460e-9186.39Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA2.490e-9183.25Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_SPAAU9.209e-7065.26Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_HUMAN1.737e-6866.49Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHH_GADMO2.268e-6863.68Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_RABIT3.275e-6766.84Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_HORSE3.275e-6765.45Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]

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Properties
Property NameValue
Genbank descriptionC31708B12EF StrClemenN Citrus clementina cDNA clone C31708B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923718 ID=FC923718; Name=FC923718; organism=Citrus clementina; type=EST; length=577bp
GAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTC
ATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTA
TCACTTCATGGGAACCTCAACATTTAGCCAGTACACAGTTGTGCATGATG
TTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGTATGCCTT
CTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACACTGCAAA
AGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACTGTTGGCC
TTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGTTATTGGT
ATAGATATTGACCCAAAAAAGTTTGATAGAGCAAAGAATTTTGGAGTTAC
TGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAGGTCCTTG
TCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCATTGGCAAT
GTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCTGGGGAAC
ATCAGTTATTGTGGGTGTTGCTGCATC
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